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Page 1
Genomic encyclopedia of sugar utilization pathways in the Shewanella genus.
Rodionov DA, Yang C, Li X, Rodionova IA, Wang Y, Obraztsova AY, Zagnitko OP, Overbeek R, Romine MF, Reed S, Fredrickson JK, Nealson KH, Osterman AL. Rodionov DA, et al. Among authors: fredrickson jk. BMC Genomics. 2010 Sep 13;11:494. doi: 10.1186/1471-2164-11-494. BMC Genomics. 2010. PMID: 20836887 Free PMC article.
Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus.
Rodionov DA, Novichkov PS, Stavrovskaya ED, Rodionova IA, Li X, Kazanov MD, Ravcheev DA, Gerasimova AV, Kazakov AE, Kovaleva GY, Permina EA, Laikova ON, Overbeek R, Romine MF, Fredrickson JK, Arkin AP, Dubchak I, Osterman AL, Gelfand MS. Rodionov DA, et al. Among authors: fredrickson jk. BMC Genomics. 2011 Jun 15;12 Suppl 1(Suppl 1):S3. doi: 10.1186/1471-2164-12-S1-S3. BMC Genomics. 2011. PMID: 21810205 Free PMC article.
Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization.
Pinchuk GE, Rodionov DA, Yang C, Li X, Osterman AL, Dervyn E, Geydebrekht OV, Reed SB, Romine MF, Collart FR, Scott JH, Fredrickson JK, Beliaev AS. Pinchuk GE, et al. Among authors: fredrickson jk. Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2874-9. doi: 10.1073/pnas.0806798106. Epub 2009 Feb 5. Proc Natl Acad Sci U S A. 2009. PMID: 19196979 Free PMC article.
Conserved synteny at the protein family level reveals genes underlying Shewanella species' cold tolerance and predicts their novel phenotypes.
Karpinets TV, Obraztsova AY, Wang Y, Schmoyer DD, Kora GH, Park BH, Serres MH, Romine MF, Land ML, Kothe TB, Fredrickson JK, Nealson KH, Uberbacher EC. Karpinets TV, et al. Among authors: fredrickson jk. Funct Integr Genomics. 2010 Mar;10(1):97-110. doi: 10.1007/s10142-009-0142-y. Epub 2009 Oct 3. Funct Integr Genomics. 2010. PMID: 19802638 Free PMC article.
Current production and metal oxide reduction by Shewanella oneidensis MR-1 wild type and mutants.
Bretschger O, Obraztsova A, Sturm CA, Chang IS, Gorby YA, Reed SB, Culley DE, Reardon CL, Barua S, Romine MF, Zhou J, Beliaev AS, Bouhenni R, Saffarini D, Mansfeld F, Kim BH, Fredrickson JK, Nealson KH. Bretschger O, et al. Among authors: fredrickson jk. Appl Environ Microbiol. 2007 Nov;73(21):7003-12. doi: 10.1128/AEM.01087-07. Epub 2007 Jul 20. Appl Environ Microbiol. 2007. PMID: 17644630 Free PMC article.
Towards environmental systems biology of Shewanella.
Fredrickson JK, Romine MF, Beliaev AS, Auchtung JM, Driscoll ME, Gardner TS, Nealson KH, Osterman AL, Pinchuk G, Reed JL, Rodionov DA, Rodrigues JL, Saffarini DA, Serres MH, Spormann AM, Zhulin IB, Tiedje JM. Fredrickson JK, et al. Nat Rev Microbiol. 2008 Aug;6(8):592-603. doi: 10.1038/nrmicro1947. Epub 2008 Jul 7. Nat Rev Microbiol. 2008. PMID: 18604222 Review.
Comparative systems biology across an evolutionary gradient within the Shewanella genus.
Konstantinidis KT, Serres MH, Romine MF, Rodrigues JL, Auchtung J, McCue LA, Lipton MS, Obraztsova A, Giometti CS, Nealson KH, Fredrickson JK, Tiedje JM. Konstantinidis KT, et al. Among authors: fredrickson jk. Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15909-14. doi: 10.1073/pnas.0902000106. Epub 2009 Sep 1. Proc Natl Acad Sci U S A. 2009. PMID: 19805231 Free PMC article.
218 results