Schug A - Search Results

1

Computational modeling of phosphotransfer complexes in two-component signaling.

Schug A, Weigt M, Hoch JA, Onuchic JN, Hwa T, Szurmant H. Schug A, et al. Methods Enzymol. 2010;471:43-58. doi: 10.1016/S0076-6879(10)71003-X. Epub 2010 Mar 1. Methods Enzymol. 2010. PMID: 20946841

2

RNA contact prediction by data efficient deep learning.

Taubert O, von der Lehr F, Bazarova A, Faber C, Knechtges P, Weiel M, Debus C, Coquelin D, Basermann A, Streit A, Kesselheim S, Götz M, Schug A. Taubert O, et al. Among authors: schug a. Commun Biol. 2023 Sep 6;6(1):913. doi: 10.1038/s42003-023-05244-9. Commun Biol. 2023. PMID: 37674020 Free PMC article.

3

Development of a scoring function for comparing simulated and experimental tumor spheroids.

Herold J, Behle E, Rosenbauer J, Ferruzzi J, Schug A. Herold J, et al. Among authors: schug a. PLoS Comput Biol. 2023 Mar 30;19(3):e1010471. doi: 10.1371/journal.pcbi.1010471. eCollection 2023 Mar. PLoS Comput Biol. 2023. PMID: 36996248 Free PMC article.

4

Mutations as trapdoors to two competing native conformations of the Rop-dimer.

Schug A, Whitford PC, Levy Y, Onuchic JN. Schug A, et al. Proc Natl Acad Sci U S A. 2007 Nov 6;104(45):17674-9. doi: 10.1073/pnas.0706077104. Epub 2007 Oct 29. Proc Natl Acad Sci U S A. 2007. PMID: 17968016 Free PMC article.

5

Geometrical features of the protein folding mechanism are a robust property of the energy landscape: a detailed investigation of several reduced models.

Oliveira LC, Schug A, Onuchic JN. Oliveira LC, et al. Among authors: schug a. J Phys Chem B. 2008 May 15;112(19):6131-6. doi: 10.1021/jp0769835. Epub 2008 Feb 6. J Phys Chem B. 2008. PMID: 18251535

6

An all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields.

Whitford PC, Noel JK, Gosavi S, Schug A, Sanbonmatsu KY, Onuchic JN. Whitford PC, et al. Among authors: schug a. Proteins. 2009 May 1;75(2):430-41. doi: 10.1002/prot.22253. Proteins. 2009. PMID: 18837035 Free PMC article.

7

Nonlocal helix formation is key to understanding S-adenosylmethionine-1 riboswitch function.

Whitford PC, Schug A, Saunders J, Hennelly SP, Onuchic JN, Sanbonmatsu KY. Whitford PC, et al. Among authors: schug a. Biophys J. 2009 Jan;96(2):L7-9. doi: 10.1016/j.bpj.2008.10.033. Biophys J. 2009. PMID: 19167285 Free PMC article.

8

Direct single-molecule observation of a protein living in two opposed native structures.

Gambin Y, Schug A, Lemke EA, Lavinder JJ, Ferreon AC, Magliery TJ, Onuchic JN, Deniz AA. Gambin Y, et al. Among authors: schug a. Proc Natl Acad Sci U S A. 2009 Jun 23;106(25):10153-8. doi: 10.1073/pnas.0904461106. Epub 2009 Jun 8. Proc Natl Acad Sci U S A. 2009. PMID: 19506258 Free PMC article.

9

Robustness and generalization of structure-based models for protein folding and function.

Lammert H, Schug A, Onuchic JN. Lammert H, et al. Among authors: schug a. Proteins. 2009 Dec;77(4):881-91. doi: 10.1002/prot.22511. Proteins. 2009. PMID: 19626713

10

High-resolution protein complexes from integrating genomic information with molecular simulation.

Schug A, Weigt M, Onuchic JN, Hwa T, Szurmant H. Schug A, et al. Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22124-9. doi: 10.1073/pnas.0912100106. Epub 2009 Dec 17. Proc Natl Acad Sci U S A. 2009. PMID: 20018738 Free PMC article.

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