Varnum SM - Search Results

1

Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice.

Teeguarden JG, Webb-Robertson BJ, Waters KM, Murray AR, Kisin ER, Varnum SM, Jacobs JM, Pounds JG, Zanger RC, Shvedova AA. Teeguarden JG, et al. Among authors: varnum sm. Toxicol Sci. 2011 Mar;120(1):123-35. doi: 10.1093/toxsci/kfq363. Epub 2010 Dec 6. Toxicol Sci. 2011. PMID: 21135415 Free PMC article.

2

Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data.

Webb-Robertson BJ, McCue LA, Waters KM, Matzke MM, Jacobs JM, Metz TO, Varnum SM, Pounds JG. Webb-Robertson BJ, et al. Among authors: varnum sm. J Proteome Res. 2010 Nov 5;9(11):5748-56. doi: 10.1021/pr1005247. Epub 2010 Oct 8. J Proteome Res. 2010. PMID: 20831241 Free PMC article.

3

Proteomic analysis of bronchoalveolar lavage fluid proteins from mice infected with Francisella tularensis ssp. novicida.

Varnum SM, Webb-Robertson BJ, Pounds JG, Moore RJ, Smith RD, Frevert CW, Skerrett SJ, Wunschel D. Varnum SM, et al. J Proteome Res. 2012 Jul 6;11(7):3690-703. doi: 10.1021/pr3001767. Epub 2012 Jun 22. J Proteome Res. 2012. PMID: 22663564 Free PMC article.

4

Toward a human blood serum proteome: analysis by multidimensional separation coupled with mass spectrometry.

Adkins JN, Varnum SM, Auberry KJ, Moore RJ, Angell NH, Smith RD, Springer DL, Pounds JG. Adkins JN, et al. Among authors: varnum sm. Mol Cell Proteomics. 2002 Dec;1(12):947-55. doi: 10.1074/mcp.m200066-mcp200. Mol Cell Proteomics. 2002. PMID: 12543931 Free article.

5

A semiautomated framework for integrating expert knowledge into disease marker identification.

Wang J, Webb-Robertson BJ, Matzke MM, Varnum SM, Brown JN, Riensche RM, Adkins JN, Jacobs JM, Hoidal JR, Scholand MB, Pounds JG, Blackburn MR, Rodland KD, McDermott JE. Wang J, et al. Among authors: varnum sm. Dis Markers. 2013;35(5):513-23. doi: 10.1155/2013/613529. Epub 2013 Oct 10. Dis Markers. 2013. PMID: 24223463 Free PMC article.

6

The effects of low-dose irradiation on inflammatory response proteins in a 3D reconstituted human skin tissue model.

Varnum SM, Springer DL, Chaffee ME, Lien KA, Webb-Robertson BJ, Waters KM, Sacksteder CA. Varnum SM, et al. Radiat Res. 2012 Dec;178(6):591-9. doi: 10.1667/RR2976.1. Epub 2012 Oct 3. Radiat Res. 2012. PMID: 23030811

7

Proteomic characterization of nipple aspirate fluid: identification of potential biomarkers of breast cancer.

Varnum SM, Covington CC, Woodbury RL, Petritis K, Kangas LJ, Abdullah MS, Pounds JG, Smith RD, Zangar RC. Varnum SM, et al. Breast Cancer Res Treat. 2003 Jul;80(1):87-97. doi: 10.1023/A:1024479106887. Breast Cancer Res Treat. 2003. PMID: 12889602

8

A Bayesian integration model of high-throughput proteomics and metabolomics data for improved early detection of microbial infections.

Webb-Robertson BJ, McCue LA, Beagley N, McDermott JE, Wunschel DS, Varnum SM, Hu JZ, Isern NG, Buchko GW, Mcateer K, Pounds JG, Skerrett SJ, Liggitt D, Frevert CW. Webb-Robertson BJ, et al. Among authors: varnum sm. Pac Symp Biocomput. 2009:451-63. Pac Symp Biocomput. 2009. PMID: 19209722 Free PMC article.

9

Proteomic biomarkers in plasma that differentiate rapid and slow decline in lung function in adult cigarette smokers with chronic obstructive pulmonary disease (COPD).

Rana GS, York TP, Edmiston JS, Zedler BK, Pounds JG, Adkins JN, Varnum SM, Smith RD, Liu Z, Li G, Webb BT, Murrelle EL, Flora JW. Rana GS, et al. Among authors: varnum sm. Anal Bioanal Chem. 2010 Jul;397(5):1809-19. doi: 10.1007/s00216-010-3742-4. Epub 2010 May 5. Anal Bioanal Chem. 2010. PMID: 20442989 Clinical Trial.

10

Enhanced detection of low abundance human plasma proteins using a tandem IgY12-SuperMix immunoaffinity separation strategy.

Qian WJ, Kaleta DT, Petritis BO, Jiang H, Liu T, Zhang X, Mottaz HM, Varnum SM, Camp DG 2nd, Huang L, Fang X, Zhang WW, Smith RD. Qian WJ, et al. Among authors: varnum sm. Mol Cell Proteomics. 2008 Oct;7(10):1963-73. doi: 10.1074/mcp.M800008-MCP200. Epub 2008 Jul 15. Mol Cell Proteomics. 2008. PMID: 18632595 Free PMC article.

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