Huson D - Search Results

1

Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project.

Gilbert JA, Meyer F, Antonopoulos D, Balaji P, Brown CT, Brown CT, Desai N, Eisen JA, Evers D, Field D, Feng W, Huson D, Jansson J, Knight R, Knight J, Kolker E, Konstantindis K, Kostka J, Kyrpides N, Mackelprang R, McHardy A, Quince C, Raes J, Sczyrba A, Shade A, Stevens R. Gilbert JA, et al. Among authors: huson d. Stand Genomic Sci. 2010 Dec 25;3(3):243-8. doi: 10.4056/sigs.1433550. Stand Genomic Sci. 2010. PMID: 21304727 Free PMC article.

2

Comparison of multiple metagenomes using phylogenetic networks based on ecological indices.

Mitra S, Gilbert JA, Field D, Huson DH. Mitra S, et al. Among authors: huson dh. ISME J. 2010 Oct;4(10):1236-42. doi: 10.1038/ismej.2010.51. Epub 2010 Apr 29. ISME J. 2010. PMID: 20428222 Free article.

3

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG.

Mitra S, Rupek P, Richter DC, Urich T, Gilbert JA, Meyer F, Wilke A, Huson DH. Mitra S, et al. BMC Bioinformatics. 2011 Feb 15;12 Suppl 1(Suppl 1):S21. doi: 10.1186/1471-2105-12-S1-S21. BMC Bioinformatics. 2011. PMID: 21342551 Free PMC article.

4

Analysis of 16S rRNA environmental sequences using MEGAN.

Mitra S, Stärk M, Huson DH. Mitra S, et al. BMC Genomics. 2011 Nov 30;12 Suppl 3(Suppl 3):S17. doi: 10.1186/1471-2164-12-S3-S17. Epub 2011 Nov 30. BMC Genomics. 2011. PMID: 22369513 Free PMC article.

5

Introduction to the analysis of environmental sequences: metagenomics with MEGAN.

Huson DH, Mitra S. Huson DH, et al. Methods Mol Biol. 2012;856:415-29. doi: 10.1007/978-1-61779-585-5_17. Methods Mol Biol. 2012. PMID: 22399469

6

Short clones or long clones? A simulation study on the use of paired reads in metagenomics.

Mitra S, Schubach M, Huson DH. Mitra S, et al. BMC Bioinformatics. 2010 Jan 18;11 Suppl 1(Suppl 1):S12. doi: 10.1186/1471-2105-11-S1-S12. BMC Bioinformatics. 2010. PMID: 20122183 Free PMC article.

7

Methods for comparative metagenomics.

Huson DH, Richter DC, Mitra S, Auch AF, Schuster SC. Huson DH, et al. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S12. doi: 10.1186/1471-2105-10-S1-S12. BMC Bioinformatics. 2009. PMID: 19208111 Free PMC article.

8

Visual and statistical comparison of metagenomes.

Mitra S, Klar B, Huson DH. Mitra S, et al. Bioinformatics. 2009 Aug 1;25(15):1849-55. doi: 10.1093/bioinformatics/btp341. Epub 2009 Jun 10. Bioinformatics. 2009. PMID: 19515961

9

Integrative analysis of environmental sequences using MEGAN4.

Huson DH, Mitra S, Ruscheweyh HJ, Weber N, Schuster SC. Huson DH, et al. Genome Res. 2011 Sep;21(9):1552-60. doi: 10.1101/gr.120618.111. Epub 2011 Jun 20. Genome Res. 2011. PMID: 21690186 Free PMC article.

10

MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data.

Huson DH, Beier S, Flade I, Górska A, El-Hadidi M, Mitra S, Ruscheweyh HJ, Tappu R. Huson DH, et al. PLoS Comput Biol. 2016 Jun 21;12(6):e1004957. doi: 10.1371/journal.pcbi.1004957. eCollection 2016 Jun. PLoS Comput Biol. 2016. PMID: 27327495 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

128 results

Search Page

Filters