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The evolutionary rate dynamically tracks changes in HIV-1 epidemics: application of a simple method for optimizing the evolutionary rate in phylogenetic trees with longitudinal data.
Maljkovic Berry I, Athreya G, Kothari M, Daniels M, Bruno WJ, Korber B, Kuiken C, Ribeiro RM, Leitner T. Maljkovic Berry I, et al. Among authors: korber b. Epidemics. 2009 Dec;1(4):230-9. doi: 10.1016/j.epidem.2009.10.003. Epub 2009 Nov 12. Epidemics. 2009. PMID: 21352769 Free PMC article.
HIV-1 nomenclature proposal.
Robertson DL, Anderson JP, Bradac JA, Carr JK, Foley B, Funkhouser RK, Gao F, Hahn BH, Kalish ML, Kuiken C, Learn GH, Leitner T, McCutchan F, Osmanov S, Peeters M, Pieniazek D, Salminen M, Sharp PM, Wolinsky S, Korber B. Robertson DL, et al. Among authors: korber b. Science. 2000 Apr 7;288(5463):55-6. doi: 10.1126/science.288.5463.55d. Science. 2000. PMID: 10766634 No abstract available.
Using human immunodeficiency virus type 1 sequences to infer historical features of the acquired immune deficiency syndrome epidemic and human immunodeficiency virus evolution.
Yusim K, Peeters M, Pybus OG, Bhattacharya T, Delaporte E, Mulanga C, Muldoon M, Theiler J, Korber B. Yusim K, et al. Among authors: korber b. Philos Trans R Soc Lond B Biol Sci. 2001 Jun 29;356(1410):855-66. doi: 10.1098/rstb.2001.0859. Philos Trans R Soc Lond B Biol Sci. 2001. PMID: 11405933 Free PMC article. Review.
HIV sequence databases.
Kuiken C, Korber B, Shafer RW. Kuiken C, et al. Among authors: korber b. AIDS Rev. 2003 Jan-Mar;5(1):52-61. AIDS Rev. 2003. PMID: 12875108 Free PMC article. Review.
Los alamos hepatitis C immunology database.
Yusim K, Richardson R, Tao N, Dalwani A, Agrawal A, Szinger J, Funkhouser R, Korber B, Kuiken C. Yusim K, et al. Among authors: korber b. Appl Bioinformatics. 2005;4(4):217-25. doi: 10.2165/00822942-200504040-00002. Appl Bioinformatics. 2005. PMID: 16309340
jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1.
Zhang M, Schultz AK, Calef C, Kuiken C, Leitner T, Korber B, Morgenstern B, Stanke M. Zhang M, et al. Among authors: korber b. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W463-5. doi: 10.1093/nar/gkl255. Nucleic Acids Res. 2006. PMID: 16845050 Free PMC article.
364 results