Huttenhower C - Search Results

1

Inferring protein function from homology using the Princeton Protein Orthology Database (P-POD).

Livstone MS, Oughtred R, Heinicke S, Vernot B, Huttenhower C, Durand D, Dolinski K. Livstone MS, et al. Among authors: huttenhower c. Curr Protoc Bioinformatics. 2011 Mar;Chapter 6:Unit 6.11. doi: 10.1002/0471250953.bi0611s33. Curr Protoc Bioinformatics. 2011. PMID: 21400696 Free PMC article.

2

The impact of incomplete knowledge on evaluation: an experimental benchmark for protein function prediction.

Huttenhower C, Hibbs MA, Myers CL, Caudy AA, Hess DC, Troyanskaya OG. Huttenhower C, et al. Bioinformatics. 2009 Sep 15;25(18):2404-10. doi: 10.1093/bioinformatics/btp397. Epub 2009 Jun 26. Bioinformatics. 2009. PMID: 19561015 Free PMC article.

3

Exploring the functional landscape of gene expression: directed search of large microarray compendia.

Hibbs MA, Hess DC, Myers CL, Huttenhower C, Li K, Troyanskaya OG. Hibbs MA, et al. Among authors: huttenhower c. Bioinformatics. 2007 Oct 15;23(20):2692-9. doi: 10.1093/bioinformatics/btm403. Epub 2007 Aug 27. Bioinformatics. 2007. PMID: 17724061

4

GOLEM: an interactive graph-based gene-ontology navigation and analysis tool.

Sealfon RS, Hibbs MA, Huttenhower C, Myers CL, Troyanskaya OG. Sealfon RS, et al. Among authors: huttenhower c. BMC Bioinformatics. 2006 Oct 10;7:443. doi: 10.1186/1471-2105-7-443. BMC Bioinformatics. 2006. PMID: 17032457 Free PMC article.

5

The Sleipnir library for computational functional genomics.

Huttenhower C, Schroeder M, Chikina MD, Troyanskaya OG. Huttenhower C, et al. Bioinformatics. 2008 Jul 1;24(13):1559-61. doi: 10.1093/bioinformatics/btn237. Epub 2008 May 21. Bioinformatics. 2008. PMID: 18499696 Free PMC article.

6

Bayesian data integration: a functional perspective.

Huttenhower C, Troyanskaya OG. Huttenhower C, et al. Comput Syst Bioinformatics Conf. 2006:341-51. Comput Syst Bioinformatics Conf. 2006. PMID: 17369653 Free article.

7

Graphle: Interactive exploration of large, dense graphs.

Huttenhower C, Mehmood SO, Troyanskaya OG. Huttenhower C, et al. BMC Bioinformatics. 2009 Dec 14;10:417. doi: 10.1186/1471-2105-10-417. BMC Bioinformatics. 2009. PMID: 20003429 Free PMC article.

8

Integrated functional networks of process, tissue, and developmental stage specific interactions in Arabidopsis thaliana.

Pop A, Huttenhower C, Iyer-Pascuzzi A, Benfey PN, Troyanskaya OG. Pop A, et al. Among authors: huttenhower c. BMC Syst Biol. 2010 Dec 31;4:180. doi: 10.1186/1752-0509-4-180. BMC Syst Biol. 2010. PMID: 21194434 Free PMC article.

9

A scalable method for integration and functional analysis of multiple microarray datasets.

Huttenhower C, Hibbs M, Myers C, Troyanskaya OG. Huttenhower C, et al. Bioinformatics. 2006 Dec 1;22(23):2890-7. doi: 10.1093/bioinformatics/btl492. Epub 2006 Sep 27. Bioinformatics. 2006. PMID: 17005538

10

Simultaneous genome-wide inference of physical, genetic, regulatory, and functional pathway components.

Park CY, Hess DC, Huttenhower C, Troyanskaya OG. Park CY, et al. Among authors: huttenhower c. PLoS Comput Biol. 2010 Nov 24;6(11):e1001009. doi: 10.1371/journal.pcbi.1001009. PLoS Comput Biol. 2010. PMID: 21124865 Free PMC article.

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