Halligan DL - Search Results

1

Positive and negative selection in murine ultraconserved noncoding elements.

Halligan DL, Oliver F, Guthrie J, Stemshorn KC, Harr B, Keightley PD. Halligan DL, et al. Mol Biol Evol. 2011 Sep;28(9):2651-60. doi: 10.1093/molbev/msr093. Epub 2011 Apr 8. Mol Biol Evol. 2011. PMID: 21478460

2

Ubiquitous selective constraints in the Drosophila genome revealed by a genome-wide interspecies comparison.

Halligan DL, Keightley PD. Halligan DL, et al. Genome Res. 2006 Jul;16(7):875-84. doi: 10.1101/gr.5022906. Epub 2006 Jun 2. Genome Res. 2006. PMID: 16751341 Free PMC article.

3

Effect of divergence time and recombination rate on molecular evolution of Drosophila INE-1 transposable elements and other candidates for neutrally evolving sites.

Wang J, Keightley PD, Halligan DL. Wang J, et al. Among authors: halligan dl. J Mol Evol. 2007 Dec;65(6):627-39. doi: 10.1007/s00239-007-9028-6. Epub 2007 Sep 25. J Mol Evol. 2007. PMID: 17896069

4

Analysis and implications of mutational variation.

Keightley PD, Halligan DL. Keightley PD, et al. Among authors: halligan dl. Genetica. 2009 Jun;136(2):359-69. doi: 10.1007/s10709-008-9304-4. Epub 2008 Jul 29. Genetica. 2009. PMID: 18663587 Review.

5

Distributions of selectively constrained sites and deleterious mutation rates in the hominid and murid genomes.

Eory L, Halligan DL, Keightley PD. Eory L, et al. Among authors: halligan dl. Mol Biol Evol. 2010 Jan;27(1):177-92. doi: 10.1093/molbev/msp219. Mol Biol Evol. 2010. PMID: 19759235

6

Patterns of DNA-sequence divergence between Drosophila miranda and D. pseudoobscura.

Marion de Procé S, Halligan DL, Keightley PD, Charlesworth B. Marion de Procé S, et al. Among authors: halligan dl. J Mol Evol. 2009 Dec;69(6):601-11. doi: 10.1007/s00239-009-9298-2. Epub 2009 Oct 27. J Mol Evol. 2009. PMID: 19859648

7

Evidence for pervasive adaptive protein evolution in wild mice.

Halligan DL, Oliver F, Eyre-Walker A, Harr B, Keightley PD. Halligan DL, et al. PLoS Genet. 2010 Jan 22;6(1):e1000825. doi: 10.1371/journal.pgen.1000825. PLoS Genet. 2010. PMID: 20107605 Free PMC article.

8

Positive and negative selection on noncoding DNA close to protein-coding genes in wild house mice.

Kousathanas A, Oliver F, Halligan DL, Keightley PD. Kousathanas A, et al. Among authors: halligan dl. Mol Biol Evol. 2011 Mar;28(3):1183-91. doi: 10.1093/molbev/msq299. Epub 2010 Nov 8. Mol Biol Evol. 2011. PMID: 21059791

9

Inference of mutation parameters and selective constraint in mammalian coding sequences by approximate Bayesian computation.

Keightley PD, Eöry L, Halligan DL, Kirkpatrick M. Keightley PD, et al. Among authors: halligan dl. Genetics. 2011 Apr;187(4):1153-61. doi: 10.1534/genetics.110.124073. Epub 2011 Feb 1. Genetics. 2011. PMID: 21288873 Free PMC article.

10

Contributions of protein-coding and regulatory change to adaptive molecular evolution in murid rodents.

Halligan DL, Kousathanas A, Ness RW, Harr B, Eöry L, Keane TM, Adams DJ, Keightley PD. Halligan DL, et al. PLoS Genet. 2013;9(12):e1003995. doi: 10.1371/journal.pgen.1003995. Epub 2013 Dec 5. PLoS Genet. 2013. PMID: 24339797 Free PMC article.

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