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Network-guided analysis of genes with altered somatic copy number and gene expression reveals pathways commonly perturbed in metastatic melanoma.
Valsesia A, Rimoldi D, Martinet D, Ibberson M, Benaglio P, Quadroni M, Waridel P, Gaillard M, Pidoux M, Rapin B, Rivolta C, Xenarios I, Simpson AJ, Antonarakis SE, Beckmann JS, Jongeneel CV, Iseli C, Stevenson BJ. Valsesia A, et al. Among authors: xenarios i. PLoS One. 2011 Apr 8;6(4):e18369. doi: 10.1371/journal.pone.0018369. PLoS One. 2011. PMID: 21494657 Free PMC article.
Probabilistic base calling of Solexa sequencing data.
Rougemont J, Amzallag A, Iseli C, Farinelli L, Xenarios I, Naef F. Rougemont J, et al. Among authors: xenarios i. BMC Bioinformatics. 2008 Oct 13;9:431. doi: 10.1186/1471-2105-9-431. BMC Bioinformatics. 2008. PMID: 18851737 Free PMC article.
EuroDia: a beta-cell gene expression resource.
Liechti R, Csárdi G, Bergmann S, Schütz F, Sengstag T, Boj SF, Servitja JM, Ferrer J, Van Lommel L, Schuit F, Klinger S, Thorens B, Naamane N, Eizirik DL, Marselli L, Bugliani M, Marchetti P, Lucas S, Holm C, Jongeneel CV, Xenarios I. Liechti R, et al. Among authors: xenarios i. Database (Oxford). 2010 Oct 12;2010:baq024. doi: 10.1093/database/baq024. Database (Oxford). 2010. PMID: 20940178 Free PMC article.
Exome sequencing identifies recurrent somatic MAP2K1 and MAP2K2 mutations in melanoma.
Nikolaev SI, Rimoldi D, Iseli C, Valsesia A, Robyr D, Gehrig C, Harshman K, Guipponi M, Bukach O, Zoete V, Michielin O, Muehlethaler K, Speiser D, Beckmann JS, Xenarios I, Halazonetis TD, Jongeneel CV, Stevenson BJ, Antonarakis SE. Nikolaev SI, et al. Among authors: xenarios i. Nat Genet. 2011 Dec 25;44(2):133-9. doi: 10.1038/ng.1026. Nat Genet. 2011. PMID: 22197931
Genome-wide profiling of the cardiac transcriptome after myocardial infarction identifies novel heart-specific long non-coding RNAs.
Ounzain S, Micheletti R, Beckmann T, Schroen B, Alexanian M, Pezzuto I, Crippa S, Nemir M, Sarre A, Johnson R, Dauvillier J, Burdet F, Ibberson M, Guigó R, Xenarios I, Heymans S, Pedrazzini T. Ounzain S, et al. Among authors: xenarios i. Eur Heart J. 2015 Feb 7;36(6):353-68a. doi: 10.1093/eurheartj/ehu180. Epub 2014 Apr 30. Eur Heart J. 2015. PMID: 24786300 Free PMC article.
228 results