Zhang K - Search Results

1

Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells.

Xu Y, Wu F, Tan L, Kong L, Xiong L, Deng J, Barbera AJ, Zheng L, Zhang H, Huang S, Min J, Nicholson T, Chen T, Xu G, Shi Y, Zhang K, Shi YG. Xu Y, et al. Among authors: zhang k, zhang h. Mol Cell. 2011 May 20;42(4):451-64. doi: 10.1016/j.molcel.2011.04.005. Epub 2011 Apr 21. Mol Cell. 2011. PMID: 21514197 Free PMC article.

2

Optimal timing of inner cell mass isolation increases the efficiency of human embryonic stem cell derivation and allows generation of sibling cell lines.

Chen AE, Egli D, Niakan K, Deng J, Akutsu H, Yamaki M, Cowan C, Fitz-Gerald C, Zhang K, Melton DA, Eggan K. Chen AE, et al. Among authors: zhang k. Cell Stem Cell. 2009 Feb 6;4(2):103-6. doi: 10.1016/j.stem.2008.12.001. Cell Stem Cell. 2009. PMID: 19200798 Free PMC article. No abstract available.

3

Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome.

Shoemaker R, Deng J, Wang W, Zhang K. Shoemaker R, et al. Among authors: zhang k. Genome Res. 2010 Jul;20(7):883-9. doi: 10.1101/gr.104695.109. Epub 2010 Apr 23. Genome Res. 2010. PMID: 20418490 Free PMC article.

4

Tet1 controls meiosis by regulating meiotic gene expression.

Yamaguchi S, Hong K, Liu R, Shen L, Inoue A, Diep D, Zhang K, Zhang Y. Yamaguchi S, et al. Among authors: zhang k, zhang y. Nature. 2012 Dec 20;492(7429):443-7. doi: 10.1038/nature11709. Epub 2012 Nov 14. Nature. 2012. PMID: 23151479 Free PMC article.

5

Dynamics of 5-methylcytosine and 5-hydroxymethylcytosine during germ cell reprogramming.

Yamaguchi S, Hong K, Liu R, Inoue A, Shen L, Zhang K, Zhang Y. Yamaguchi S, et al. Among authors: zhang k, zhang y. Cell Res. 2013 Mar;23(3):329-39. doi: 10.1038/cr.2013.22. Epub 2013 Feb 12. Cell Res. 2013. PMID: 23399596 Free PMC article.

6

Genome-wide analysis reveals TET- and TDG-dependent 5-methylcytosine oxidation dynamics.

Shen L, Wu H, Diep D, Yamaguchi S, D'Alessio AC, Fung HL, Zhang K, Zhang Y. Shen L, et al. Among authors: zhang k, zhang y. Cell. 2013 Apr 25;153(3):692-706. doi: 10.1016/j.cell.2013.04.002. Epub 2013 Apr 18. Cell. 2013. PMID: 23602152 Free PMC article.

7

Genome-wide mapping of the sixth base.

Diep D, Zhang K. Diep D, et al. Among authors: zhang k. Genome Biol. 2011 Jun 20;12(6):116. doi: 10.1186/gb-2011-12-6-116. Epub 2011 Jun 20. Genome Biol. 2011. PMID: 21682934 Free PMC article.

8

Comparable frequencies of coding mutations and loss of imprinting in human pluripotent cells derived by nuclear transfer and defined factors.

Johannesson B, Sagi I, Gore A, Paull D, Yamada M, Golan-Lev T, Li Z, LeDuc C, Shen Y, Stern S, Xu N, Ma H, Kang E, Mitalipov S, Sauer MV, Zhang K, Benvenisty N, Egli D. Johannesson B, et al. Among authors: zhang k. Cell Stem Cell. 2014 Nov 6;15(5):634-42. doi: 10.1016/j.stem.2014.10.002. Epub 2014 Nov 6. Cell Stem Cell. 2014. PMID: 25517467 Free article.

9

Targeted methylation sequencing reveals dysregulated Wnt signaling in Parkinson disease.

Zhang L, Deng J, Pan Q, Zhan Y, Fan JB, Zhang K, Zhang Z. Zhang L, et al. Among authors: zhang z, zhang k. J Genet Genomics. 2016 Oct 20;43(10):587-592. doi: 10.1016/j.jgg.2016.05.002. Epub 2016 May 13. J Genet Genomics. 2016. PMID: 27692691

10

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution.

Rozenblatt-Rosen O, Regev A, Oberdoerffer P, Nawy T, Hupalowska A, Rood JE, Ashenberg O, Cerami E, Coffey RJ, Demir E, Ding L, Esplin ED, Ford JM, Goecks J, Ghosh S, Gray JW, Guinney J, Hanlon SE, Hughes SK, Hwang ES, Iacobuzio-Donahue CA, Jané-Valbuena J, Johnson BE, Lau KS, Lively T, Mazzilli SA, Pe'er D, Santagata S, Shalek AK, Schapiro D, Snyder MP, Sorger PK, Spira AE, Srivastava S, Tan K, West RB, Williams EH; Human Tumor Atlas Network. Rozenblatt-Rosen O, et al. Cell. 2020 Apr 16;181(2):236-249. doi: 10.1016/j.cell.2020.03.053. Cell. 2020. PMID: 32302568 Free PMC article. Review.

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