Karkman A - Search Results

1

Fish farming affects the abundance and diversity of the mercury resistance gene merA in marine sediments.

Pitkänen LK, Tamminen M, Hynninen A, Karkman A, Corander J, Kotilainen A, Virta M. Pitkänen LK, et al. Among authors: karkman a. Microbes Environ. 2011;26(3):205-11. doi: 10.1264/jsme2.me11119. Epub 2011 May 11. Microbes Environ. 2011. PMID: 21558673 Free article.

2

Tetracycline resistance genes persist at aquaculture farms in the absence of selection pressure.

Tamminen M, Karkman A, Lõhmus A, Muziasari WI, Takasu H, Wada S, Suzuki S, Virta M. Tamminen M, et al. Among authors: karkman a. Environ Sci Technol. 2011 Jan 15;45(2):386-91. doi: 10.1021/es102725n. Epub 2010 Dec 15. Environ Sci Technol. 2011. PMID: 21158437

3

Cold temperature decreases bacterial species richness in nitrogen-removing bioreactors treating inorganic mine waters.

Karkman A, Mattila K, Tamminen M, Virta M. Karkman A, et al. Biotechnol Bioeng. 2011 Dec;108(12):2876-83. doi: 10.1002/bit.23267. Epub 2011 Aug 4. Biotechnol Bioeng. 2011. PMID: 21769859

4

Sulphonamide and trimethoprim resistance genes persist in sediments at Baltic Sea aquaculture farms but are not detected in the surrounding environment.

Muziasari WI, Managaki S, Pärnänen K, Karkman A, Lyra C, Tamminen M, Suzuki S, Virta M. Muziasari WI, et al. Among authors: karkman a. PLoS One. 2014 Mar 20;9(3):e92702. doi: 10.1371/journal.pone.0092702. eCollection 2014. PLoS One. 2014. PMID: 24651770 Free PMC article.

5

High-throughput quantification of antibiotic resistance genes from an urban wastewater treatment plant.

Karkman A, Johnson TA, Lyra C, Stedtfeld RD, Tamminen M, Tiedje JM, Virta M. Karkman A, et al. FEMS Microbiol Ecol. 2016 Mar;92(3):fiw014. doi: 10.1093/femsec/fiw014. Epub 2016 Jan 31. FEMS Microbiol Ecol. 2016. PMID: 26832203

6

Aquaculture changes the profile of antibiotic resistance and mobile genetic element associated genes in Baltic Sea sediments.

Muziasari WI, Pärnänen K, Johnson TA, Lyra C, Karkman A, Stedtfeld RD, Tamminen M, Tiedje JM, Virta M. Muziasari WI, et al. Among authors: karkman a. FEMS Microbiol Ecol. 2016 Apr;92(4):fiw052. doi: 10.1093/femsec/fiw052. Epub 2016 Mar 13. FEMS Microbiol Ecol. 2016. PMID: 26976842

7

Evaluating the mobility potential of antibiotic resistance genes in environmental resistomes without metagenomics.

Pärnänen K, Karkman A, Tamminen M, Lyra C, Hultman J, Paulin L, Virta M. Pärnänen K, et al. Among authors: karkman a. Sci Rep. 2016 Oct 21;6:35790. doi: 10.1038/srep35790. Sci Rep. 2016. PMID: 27767072 Free PMC article.

8

Host range of antibiotic resistance genes in wastewater treatment plant influent and effluent.

Hultman J, Tamminen M, Pärnänen K, Cairns J, Karkman A, Virta M. Hultman J, et al. Among authors: karkman a. FEMS Microbiol Ecol. 2018 Apr 1;94(4):fiy038. doi: 10.1093/femsec/fiy038. FEMS Microbiol Ecol. 2018. PMID: 29514229 Free PMC article.

9

Discovery of bacterial polyhydroxyalkanoate synthase (PhaC)-encoding genes from seasonal Baltic Sea ice and cold estuarine waters.

Pärnänen K, Karkman A, Virta M, Eronen-Rasimus E, Kaartokallio H. Pärnänen K, et al. Among authors: karkman a. Extremophiles. 2015 Jan;19(1):197-206. doi: 10.1007/s00792-014-0699-9. Epub 2014 Oct 4. Extremophiles. 2015. PMID: 25280551

10

"Every Gene Is Everywhere but the Environment Selects": Global Geolocalization of Gene Sharing in Environmental Samples through Network Analysis.

Fondi M, Karkman A, Tamminen MV, Bosi E, Virta M, Fani R, Alm E, McInerney JO. Fondi M, et al. Among authors: karkman a. Genome Biol Evol. 2016 May 13;8(5):1388-400. doi: 10.1093/gbe/evw077. Genome Biol Evol. 2016. PMID: 27190206 Free PMC article.

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