Zarnack K - Search Results

1

iCLIP--transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution.

Konig J, Zarnack K, Rot G, Curk T, Kayikci M, Zupan B, Turner DJ, Luscombe NM, Ule J. Konig J, et al. Among authors: zarnack k. J Vis Exp. 2011 Apr 30;(50):2638. doi: 10.3791/2638. J Vis Exp. 2011. PMID: 21559008 Free PMC article.

2

Heterogenous nuclear ribonucleoprotein D-like controls endothelial cell functions.

Fischer S, Lichtenthaeler C, Stepanenko A, Heyl F, Maticzka D, Kemmerer K, Klostermann M, Backofen R, Zarnack K, Weigand JE. Fischer S, et al. Among authors: zarnack k. Biol Chem. 2023 Nov 10;405(4):229-239. doi: 10.1515/hsz-2023-0254. Print 2024 Apr 25. Biol Chem. 2023. PMID: 37942876 Free article.

3

The fungal RNA-binding protein Rrm4 mediates long-distance transport of ubi1 and rho3 mRNAs.

König J, Baumann S, Koepke J, Pohlmann T, Zarnack K, Feldbrügge M. König J, et al. Among authors: zarnack k. EMBO J. 2009 Jul 8;28(13):1855-66. doi: 10.1038/emboj.2009.145. Epub 2009 Jun 4. EMBO J. 2009. PMID: 19494833 Free PMC article.

4

Tandem KH domains of Khd4 recognize AUACCC and are essential for regulation of morphology as well as pathogenicity in Ustilago maydis.

Vollmeister E, Haag C, Zarnack K, Baumann S, König J, Mannhaupt G, Feldbrügge M. Vollmeister E, et al. Among authors: zarnack k. RNA. 2009 Dec;15(12):2206-18. doi: 10.1261/rna.1817609. Epub 2009 Oct 23. RNA. 2009. PMID: 19854870 Free PMC article.

5

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution.

König J, Zarnack K, Rot G, Curk T, Kayikci M, Zupan B, Turner DJ, Luscombe NM, Ule J. König J, et al. Among authors: zarnack k. Nat Struct Mol Biol. 2010 Jul;17(7):909-15. doi: 10.1038/nsmb.1838. Epub 2010 Jul 4. Nat Struct Mol Biol. 2010. PMID: 20601959 Free PMC article.

6

iCLIP predicts the dual splicing effects of TIA-RNA interactions.

Wang Z, Kayikci M, Briese M, Zarnack K, Luscombe NM, Rot G, Zupan B, Curk T, Ule J. Wang Z, et al. Among authors: zarnack k. PLoS Biol. 2010 Oct 26;8(10):e1000530. doi: 10.1371/journal.pbio.1000530. PLoS Biol. 2010. PMID: 21048981 Free PMC article.

7

The RNA-binding protein Rrm4 is essential for efficient secretion of endochitinase Cts1.

Koepke J, Kaffarnik F, Haag C, Zarnack K, Luscombe NM, König J, Ule J, Kellner R, Begerow D, Feldbrügge M. Koepke J, et al. Among authors: zarnack k. Mol Cell Proteomics. 2011 Dec;10(12):M111.011213. doi: 10.1074/mcp.M111.011213. Epub 2011 Aug 1. Mol Cell Proteomics. 2011. PMID: 21808052 Free PMC article.

8

Analysis of alternative splicing associated with aging and neurodegeneration in the human brain.

Tollervey JR, Wang Z, Hortobágyi T, Witten JT, Zarnack K, Kayikci M, Clark TA, Schweitzer AC, Rot G, Curk T, Zupan B, Rogelj B, Shaw CE, Ule J. Tollervey JR, et al. Among authors: zarnack k. Genome Res. 2011 Oct;21(10):1572-82. doi: 10.1101/gr.122226.111. Epub 2011 Aug 16. Genome Res. 2011. PMID: 21846794 Free PMC article.

9

Protein-RNA interactions: new genomic technologies and perspectives.

König J, Zarnack K, Luscombe NM, Ule J. König J, et al. Among authors: zarnack k. Nat Rev Genet. 2012 Jan 18;13(2):77-83. doi: 10.1038/nrg3141. Nat Rev Genet. 2012. PMID: 22251872 Review.

10

Direct competition between hnRNP C and U2AF65 protects the transcriptome from the exonization of Alu elements.

Zarnack K, König J, Tajnik M, Martincorena I, Eustermann S, Stévant I, Reyes A, Anders S, Luscombe NM, Ule J. Zarnack K, et al. Cell. 2013 Jan 31;152(3):453-66. doi: 10.1016/j.cell.2012.12.023. Cell. 2013. PMID: 23374342 Free PMC article.

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