Kmiecik S - Search Results

1

Simulation of chaperonin effect on protein folding: a shift from nucleation-condensation to framework mechanism.

Kmiecik S, Kolinski A. Kmiecik S, et al. J Am Chem Soc. 2011 Jul 6;133(26):10283-9. doi: 10.1021/ja203275f. Epub 2011 Jun 10. J Am Chem Soc. 2011. PMID: 21618995 Free PMC article.

2

Efficient improvement of the proliferation, differentiation, and anti-arthritic capacity of mesenchymal stem cells by simply culturing on the immobilized FGF2 derived peptide, 44-ERGVVSIKGV-53.

Lee SB, Abdal Dayem A, Kmiecik S, Lim KM, Seo DS, Kim HT, Kumar Biswas P, Do M, Kim DH, Cho SG. Lee SB, et al. Among authors: kmiecik s. J Adv Res. 2024 Aug;62:119-141. doi: 10.1016/j.jare.2023.09.041. Epub 2023 Sep 28. J Adv Res. 2024. PMID: 37777063 Free PMC article.

3

Denatured proteins and early folding intermediates simulated in a reduced conformational space.

Kmiecik S, Kurcinski M, Rutkowska A, Gront D, Kolinski A. Kmiecik S, et al. Acta Biochim Pol. 2006;53(1):131-44. Epub 2005 Dec 19. Acta Biochim Pol. 2006. PMID: 16365636

4

Backbone building from quadrilaterals: a fast and accurate algorithm for protein backbone reconstruction from alpha carbon coordinates.

Gront D, Kmiecik S, Kolinski A. Gront D, et al. Among authors: kmiecik s. J Comput Chem. 2007 Jul 15;28(9):1593-1597. doi: 10.1002/jcc.20624. J Comput Chem. 2007. PMID: 17342707

5

Towards the high-resolution protein structure prediction. Fast refinement of reduced models with all-atom force field.

Kmiecik S, Gront D, Kolinski A. Kmiecik S, et al. BMC Struct Biol. 2007 Jun 29;7:43. doi: 10.1186/1472-6807-7-43. BMC Struct Biol. 2007. PMID: 17603876 Free PMC article.

6

Characterization of protein-folding pathways by reduced-space modeling.

Kmiecik S, Kolinski A. Kmiecik S, et al. Proc Natl Acad Sci U S A. 2007 Jul 24;104(30):12330-5. doi: 10.1073/pnas.0702265104. Epub 2007 Jul 16. Proc Natl Acad Sci U S A. 2007. PMID: 17636132 Free PMC article.

7

Folding pathway of the b1 domain of protein G explored by multiscale modeling.

Kmiecik S, Kolinski A. Kmiecik S, et al. Biophys J. 2008 Feb 1;94(3):726-36. doi: 10.1529/biophysj.107.116095. Epub 2007 Sep 21. Biophys J. 2008. PMID: 17890394 Free PMC article.

8

From coarse-grained to atomic-level characterization of protein dynamics: transition state for the folding of B domain of protein A.

Kmiecik S, Gront D, Kouza M, Kolinski A. Kmiecik S, et al. J Phys Chem B. 2012 Jun 14;116(23):7026-32. doi: 10.1021/jp301720w. Epub 2012 Apr 19. J Phys Chem B. 2012. PMID: 22486297

9

CABS-flex: Server for fast simulation of protein structure fluctuations.

Jamroz M, Kolinski A, Kmiecik S. Jamroz M, et al. Among authors: kmiecik s. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W427-31. doi: 10.1093/nar/gkt332. Epub 2013 May 8. Nucleic Acids Res. 2013. PMID: 23658222 Free PMC article.

10

Combining coarse-grained protein models with replica-exchange all-atom molecular dynamics.

Wabik J, Kmiecik S, Gront D, Kouza M, Koliński A. Wabik J, et al. Among authors: kmiecik s. Int J Mol Sci. 2013 May 10;14(5):9893-905. doi: 10.3390/ijms14059893. Int J Mol Sci. 2013. PMID: 23665897 Free PMC article.

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