Batzoglou S - Search Results

1

Reconstruction of genealogical relationships with applications to Phase III of HapMap.

Kyriazopoulou-Panagiotopoulou S, Kashef Haghighi D, Aerni SJ, Sundquist A, Bercovici S, Batzoglou S. Kyriazopoulou-Panagiotopoulou S, et al. Among authors: batzoglou s. Bioinformatics. 2011 Jul 1;27(13):i333-41. doi: 10.1093/bioinformatics/btr243. Bioinformatics. 2011. PMID: 21685089 Free PMC article.

2

Reveel: large-scale population genotyping using low-coverage sequencing data.

Huang L, Wang B, Chen R, Bercovici S, Batzoglou S. Huang L, et al. Among authors: batzoglou s. Bioinformatics. 2016 Jun 1;32(11):1686-96. doi: 10.1093/bioinformatics/btv530. Epub 2015 Sep 9. Bioinformatics. 2016. PMID: 26353840

3

Effect of genetic divergence in identifying ancestral origin using HAPAA.

Sundquist A, Fratkin E, Do CB, Batzoglou S. Sundquist A, et al. Among authors: batzoglou s. Genome Res. 2008 Apr;18(4):676-82. doi: 10.1101/gr.072850.107. Epub 2008 Mar 18. Genome Res. 2008. PMID: 18353807 Free PMC article.

4

Ancestry inference in complex admixtures via variable-length Markov chain linkage models.

Rodriguez JM, Bercovici S, Elmore M, Batzoglou S. Rodriguez JM, et al. Among authors: batzoglou s. J Comput Biol. 2013 Mar;20(3):199-211. doi: 10.1089/cmb.2012.0088. Epub 2013 Feb 19. J Comput Biol. 2013. PMID: 23421795 Free PMC article.

5

Automated cellular annotation for high-resolution images of adult Caenorhabditis elegans.

Aerni SJ, Liu X, Do CB, Gross SS, Nguyen A, Guo SD, Long F, Peng H, Kim SS, Batzoglou S. Aerni SJ, et al. Among authors: batzoglou s. Bioinformatics. 2013 Jul 1;29(13):i18-26. doi: 10.1093/bioinformatics/btt223. Bioinformatics. 2013. PMID: 23812982 Free PMC article.

6

Parente2: a fast and accurate method for detecting identity by descent.

Rodriguez JM, Bercovici S, Huang L, Frostig R, Batzoglou S. Rodriguez JM, et al. Among authors: batzoglou s. Genome Res. 2015 Feb;25(2):280-9. doi: 10.1101/gr.173641.114. Epub 2014 Oct 1. Genome Res. 2015. PMID: 25273070 Free PMC article.

7

An effective filter for IBD detection in large data sets.

Huang L, Bercovici S, Rodriguez JM, Batzoglou S. Huang L, et al. Among authors: batzoglou s. PLoS One. 2014 Mar 25;9(3):e92713. doi: 10.1371/journal.pone.0092713. eCollection 2014. PLoS One. 2014. PMID: 24667521 Free PMC article.

8

Inference of tumor phylogenies with improved somatic mutation discovery.

Salari R, Saleh SS, Kashef-Haghighi D, Khavari D, Newburger DE, West RB, Sidow A, Batzoglou S. Salari R, et al. Among authors: batzoglou s. J Comput Biol. 2013 Nov;20(11):933-44. doi: 10.1089/cmb.2013.0106. J Comput Biol. 2013. PMID: 24195709 Free PMC article.

9

Whole-genome sequencing and assembly with high-throughput, short-read technologies.

Sundquist A, Ronaghi M, Tang H, Pevzner P, Batzoglou S. Sundquist A, et al. Among authors: batzoglou s. PLoS One. 2007 May 30;2(5):e484. doi: 10.1371/journal.pone.0000484. PLoS One. 2007. PMID: 17534434 Free PMC article.

10

Analysis of cell fate from single-cell gene expression profiles in C. elegans.

Liu X, Long F, Peng H, Aerni SJ, Jiang M, Sánchez-Blanco A, Murray JI, Preston E, Mericle B, Batzoglou S, Myers EW, Kim SK. Liu X, et al. Among authors: batzoglou s. Cell. 2009 Oct 30;139(3):623-33. doi: 10.1016/j.cell.2009.08.044. Cell. 2009. PMID: 19879847 Free PMC article.

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