DeAngelis KM - Search Results

1

PCR amplification-independent methods for detection of microbial communities by the high-density microarray PhyloChip.

DeAngelis KM, Wu CH, Beller HR, Brodie EL, Chakraborty R, DeSantis TZ, Fortney JL, Hazen TC, Osman SR, Singer ME, Tom LM, Andersen GL. DeAngelis KM, et al. Appl Environ Microbiol. 2011 Sep;77(18):6313-22. doi: 10.1128/AEM.05262-11. Epub 2011 Jul 15. Appl Environ Microbiol. 2011. PMID: 21764955 Free PMC article.

2

Two novel bacterial biosensors for detection of nitrate availability in the rhizosphere.

DeAngelis KM, Ji P, Firestone MK, Lindow SE. DeAngelis KM, et al. Appl Environ Microbiol. 2005 Dec;71(12):8537-47. doi: 10.1128/AEM.71.12.8537-8547.2005. Appl Environ Microbiol. 2005. PMID: 16332845 Free PMC article.

3

Sensitive whole-cell biosensor suitable for detecting a variety of N-acyl homoserine lactones in intact rhizosphere microbial communities.

DeAngelis KM, Firestone MK, Lindow SE. DeAngelis KM, et al. Appl Environ Microbiol. 2007 Jun;73(11):3724-7. doi: 10.1128/AEM.02187-06. Epub 2007 Mar 30. Appl Environ Microbiol. 2007. PMID: 17400771 Free PMC article.

4

Selective progressive response of soil microbial community to wild oat roots.

DeAngelis KM, Brodie EL, DeSantis TZ, Andersen GL, Lindow SE, Firestone MK. DeAngelis KM, et al. ISME J. 2009 Feb;3(2):168-78. doi: 10.1038/ismej.2008.103. Epub 2008 Nov 13. ISME J. 2009. PMID: 19005498 Free article.

5

Bacterial diversity analysis of Huanglongbing pathogen-infected citrus, using PhyloChip arrays and 16S rRNA gene clone library sequencing.

Sagaram US, DeAngelis KM, Trivedi P, Andersen GL, Lu SE, Wang N. Sagaram US, et al. Among authors: deangelis km. Appl Environ Microbiol. 2009 Mar;75(6):1566-74. doi: 10.1128/AEM.02404-08. Epub 2009 Jan 16. Appl Environ Microbiol. 2009. PMID: 19151177 Free PMC article.

6

Microbial communities acclimate to recurring changes in soil redox potential status.

DeAngelis KM, Silver WL, Thompson AW, Firestone MK. DeAngelis KM, et al. Environ Microbiol. 2010 Dec;12(12):3137-49. doi: 10.1111/j.1462-2920.2010.02286.x. Environ Microbiol. 2010. PMID: 20629704

7

Characterization of trapped lignin-degrading microbes in tropical forest soil.

DeAngelis KM, Allgaier M, Chavarria Y, Fortney JL, Hugenholtz P, Simmons B, Sublette K, Silver WL, Hazen TC. DeAngelis KM, et al. PLoS One. 2011 Apr 29;6(4):e19306. doi: 10.1371/journal.pone.0019306. PLoS One. 2011. PMID: 21559391 Free PMC article.

8

Complete genome sequence of "Enterobacter lignolyticus" SCF1.

Deangelis KM, D'Haeseleer P, Chivian D, Fortney JL, Khudyakov J, Simmons B, Woo H, Arkin AP, Davenport KW, Goodwin L, Chen A, Ivanova N, Kyrpides NC, Mavromatis K, Woyke T, Hazen TC. Deangelis KM, et al. Stand Genomic Sci. 2011 Oct 15;5(1):69-85. doi: 10.4056/sigs.2104875. Epub 2011 Sep 23. Stand Genomic Sci. 2011. PMID: 22180812 Free PMC article.

9

Application of phenotypic microarrays to environmental microbiology.

Borglin S, Joyner D, DeAngelis KM, Khudyakov J, D'haeseleer P, Joachimiak MP, Hazen T. Borglin S, et al. Among authors: deangelis km. Curr Opin Biotechnol. 2012 Feb;23(1):41-8. doi: 10.1016/j.copbio.2011.12.006. Epub 2012 Jan 2. Curr Opin Biotechnol. 2012. PMID: 22217654 Free article. Review.

10

Phylogenetic clustering of soil microbial communities by 16S rRNA but not 16S rRNA genes.

DeAngelis KM, Firestone MK. DeAngelis KM, et al. Appl Environ Microbiol. 2012 Apr;78(7):2459-61. doi: 10.1128/AEM.07547-11. Epub 2012 Jan 27. Appl Environ Microbiol. 2012. PMID: 22286992 Free PMC article.

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