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Page 1
Poison cassette exon splicing of SRSF6 regulates nuclear speckle dispersal and the response to hypoxia.
de Oliveira Freitas Machado C, Schafranek M, Brüggemann M, Hernández Cañás MC, Keller M, Di Liddo A, Brezski A, Blümel N, Arnold B, Bremm A, Wittig I, Jaé N, McNicoll F, Dimmeler S, Zarnack K, Müller-McNicoll M. de Oliveira Freitas Machado C, et al. Among authors: zarnack k. Nucleic Acids Res. 2023 Jan 25;51(2):870-890. doi: 10.1093/nar/gkac1225. Nucleic Acids Res. 2023. PMID: 36620874 Free PMC article.
Hypoxia-altered cholesterol homeostasis enhances the expression of interferon-stimulated genes upon SARS-CoV-2 infections in monocytes.
Bauer R, Meyer SP, Raue R, Palmer MA, Guerrero Ruiz VM, Cardamone G, Rösser S, Heffels M, Roesmann F, Wilhelm A, Lütjohann D, Zarnack K, Fuhrmann DC, Widera M, Schmid T, Brüne B. Bauer R, et al. Among authors: zarnack k. Front Immunol. 2023 Jun 12;14:1121864. doi: 10.3389/fimmu.2023.1121864. eCollection 2023. Front Immunol. 2023. PMID: 37377965 Free PMC article.
Heterogenous nuclear ribonucleoprotein D-like controls endothelial cell functions.
Fischer S, Lichtenthaeler C, Stepanenko A, Heyl F, Maticzka D, Kemmerer K, Klostermann M, Backofen R, Zarnack K, Weigand JE. Fischer S, et al. Among authors: zarnack k. Biol Chem. 2023 Nov 10;405(4):229-239. doi: 10.1515/hsz-2023-0254. Print 2024 Apr 25. Biol Chem. 2023. PMID: 37942876 Free article.
Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications.
Acera Mateos P, J Sethi A, Ravindran A, Srivastava A, Woodward K, Mahmud S, Kanchi M, Guarnacci M, Xu J, W S Yuen Z, Zhou Y, Sneddon A, Hamilton W, Gao J, M Starrs L, Hayashi R, Wickramasinghe V, Zarnack K, Preiss T, Burgio G, Dehorter N, E Shirokikh N, Eyras E. Acera Mateos P, et al. Among authors: zarnack k. Nat Commun. 2024 May 9;15(1):3899. doi: 10.1038/s41467-024-47953-7. Nat Commun. 2024. PMID: 38724548 Free PMC article.
A high-resolution map of functional miR-181 response elements in the thymus reveals the role of coding sequence targeting and an alternative seed match.
Verheyden NA, Klostermann M, Brüggemann M, Steede HM, Scholz A, Amr S, Lichtenthaeler C, Münch C, Schmid T, Zarnack K, Krueger A. Verheyden NA, et al. Among authors: zarnack k. Nucleic Acids Res. 2024 Aug 12;52(14):8515-8533. doi: 10.1093/nar/gkae416. Nucleic Acids Res. 2024. PMID: 38783381 Free PMC article.
A systematic analysis of circRNAs in subnuclear compartments.
Brezski A, Murtagh J, Schulz MH, Zarnack K. Brezski A, et al. Among authors: zarnack k. RNA Biol. 2024 Jan;21(1):1-16. doi: 10.1080/15476286.2024.2395718. Epub 2024 Sep 10. RNA Biol. 2024. PMID: 39257052 Free PMC article.
Pathogenic proteotoxicity of cryptic splicing is alleviated by ubiquitination and ER-phagy.
Prieto-Garcia C, Matkovic V, Mosler T, Li C, Liang J, Oo JA, Haidle F, Mačinković I, Cabrera-Orefice A, Berkane R, Giuliani G, Xu F, Jacomin AC, Tomaskovic I, Basoglu M, Hoffmann ME, Rathore R, Cetin R, Boutguetait D, Bozkurt S, Hernández Cañás MC, Keller M, Busam J, Shah VJ, Wittig I, Kaulich M, Beli P, Galej WP, Ebersberger I, Wang L, Münch C, Stolz A, Brandes RP, Tse WKF, Eimer S, Stainier DYR, Legewie S, Zarnack K, Müller-McNicoll M, Dikic I. Prieto-Garcia C, et al. Among authors: zarnack k. Science. 2024 Nov 15;386(6723):768-776. doi: 10.1126/science.adi5295. Epub 2024 Nov 14. Science. 2024. PMID: 39541449
79 results