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Page 1
Tracing determinants of dual substrate specificity in glycoside hydrolase family 5.
Chen Z, Friedland GD, Pereira JH, Reveco SA, Chan R, Park JI, Thelen MP, Adams PD, Arkin AP, Keasling JD, Blanch HW, Simmons BA, Sale KL, Chivian D, Chhabra SR. Chen Z, et al. Among authors: chivian d. J Biol Chem. 2012 Jul 20;287(30):25335-43. doi: 10.1074/jbc.M112.362640. Epub 2012 May 29. J Biol Chem. 2012. PMID: 22645145 Free PMC article.
Phylogenomically guided identification of industrially relevant GH1 β-glucosidases through DNA synthesis and nanostructure-initiator mass spectrometry.
Heins RA, Cheng X, Nath S, Deng K, Bowen BP, Chivian DC, Datta S, Friedland GD, D'Haeseleer P, Wu D, Tran-Gyamfi M, Scullin CS, Singh S, Shi W, Hamilton MG, Bendall ML, Sczyrba A, Thompson J, Feldman T, Guenther JM, Gladden JM, Cheng JF, Adams PD, Rubin EM, Simmons BA, Sale KL, Northen TR, Deutsch S. Heins RA, et al. Among authors: chivian dc. ACS Chem Biol. 2014 Sep 19;9(9):2082-91. doi: 10.1021/cb500244v. Epub 2014 Jul 17. ACS Chem Biol. 2014. PMID: 24984213 Free PMC article.
GLAMM: Genome-Linked Application for Metabolic Maps.
Bates JT, Chivian D, Arkin AP. Bates JT, et al. Among authors: chivian d. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W400-5. doi: 10.1093/nar/gkr433. Epub 2011 May 29. Nucleic Acids Res. 2011. PMID: 21624891 Free PMC article.
Genomics for environmental microbiology.
Deutschbauer AM, Chivian D, Arkin AP. Deutschbauer AM, et al. Among authors: chivian d. Curr Opin Biotechnol. 2006 Jun;17(3):229-35. doi: 10.1016/j.copbio.2006.04.003. Epub 2006 May 2. Curr Opin Biotechnol. 2006. PMID: 16650754 Review.
MicrobesOnline: an integrated portal for comparative and functional genomics.
Dehal PS, Joachimiak MP, Price MN, Bates JT, Baumohl JK, Chivian D, Friedland GD, Huang KH, Keller K, Novichkov PS, Dubchak IL, Alm EJ, Arkin AP. Dehal PS, et al. Among authors: chivian d. Nucleic Acids Res. 2010 Jan;38(Database issue):D396-400. doi: 10.1093/nar/gkp919. Epub 2009 Nov 11. Nucleic Acids Res. 2010. PMID: 19906701 Free PMC article.
A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Among authors: chivian d. Nat Biotechnol. 2021 Apr;39(4):499-509. doi: 10.1038/s41587-020-0718-6. Epub 2020 Nov 9. Nat Biotechnol. 2021. PMID: 33169036 Free PMC article.
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