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An integrative genomic approach identifies p73 and p63 as activators of miR-200 microRNA family transcription.
Knouf EC, Garg K, Arroyo JD, Correa Y, Sarkar D, Parkin RK, Wurz K, O'Briant KC, Godwin AK, Urban ND, Ruzzo WL, Gentleman R, Drescher CW, Swisher EM, Tewari M. Knouf EC, et al. Among authors: gentleman r. Nucleic Acids Res. 2012 Jan;40(2):499-510. doi: 10.1093/nar/gkr731. Epub 2011 Sep 14. Nucleic Acids Res. 2012. PMID: 21917857 Free PMC article.
Quality assessment and data analysis for microRNA expression arrays.
Sarkar D, Parkin R, Wyman S, Bendoraite A, Sather C, Delrow J, Godwin AK, Drescher C, Huber W, Gentleman R, Tewari M. Sarkar D, et al. Among authors: gentleman r. Nucleic Acids Res. 2009 Feb;37(2):e17. doi: 10.1093/nar/gkn932. Epub 2008 Dec 22. Nucleic Acids Res. 2009. PMID: 19103660 Free PMC article.
MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries.
Bar M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM, Ruzzo WL, Ware C, Radich JP, Gentleman R, Ruohola-Baker H, Tewari M. Bar M, et al. Among authors: gentleman r. Stem Cells. 2008 Oct;26(10):2496-505. doi: 10.1634/stemcells.2008-0356. Epub 2008 Jun 26. Stem Cells. 2008. PMID: 18583537 Free PMC article.
Circulating microRNAs as stable blood-based markers for cancer detection.
Mitchell PS, Parkin RK, Kroh EM, Fritz BR, Wyman SK, Pogosova-Agadjanyan EL, Peterson A, Noteboom J, O'Briant KC, Allen A, Lin DW, Urban N, Drescher CW, Knudsen BS, Stirewalt DL, Gentleman R, Vessella RL, Nelson PS, Martin DB, Tewari M. Mitchell PS, et al. Among authors: gentleman r. Proc Natl Acad Sci U S A. 2008 Jul 29;105(30):10513-8. doi: 10.1073/pnas.0804549105. Epub 2008 Jul 28. Proc Natl Acad Sci U S A. 2008. PMID: 18663219 Free PMC article.
Discriminative motif analysis of high-throughput dataset.
Yao Z, Macquarrie KL, Fong AP, Tapscott SJ, Ruzzo WL, Gentleman RC. Yao Z, et al. Bioinformatics. 2014 Mar 15;30(6):775-83. doi: 10.1093/bioinformatics/btt615. Epub 2013 Oct 25. Bioinformatics. 2014. PMID: 24162561 Free PMC article.
86 results