Waldron L - Search Results

1

Optimized application of penalized regression methods to diverse genomic data.

Waldron L, Pintilie M, Tsao MS, Shepherd FA, Huttenhower C, Jurisica I. Waldron L, et al. Bioinformatics. 2011 Dec 15;27(24):3399-406. doi: 10.1093/bioinformatics/btr591. Bioinformatics. 2011. PMID: 22156367 Free PMC article.

2

Machine learning for microbiologists.

Asnicar F, Thomas AM, Passerini A, Waldron L, Segata N. Asnicar F, et al. Among authors: waldron l. Nat Rev Microbiol. 2024 Apr;22(4):191-205. doi: 10.1038/s41579-023-00984-1. Epub 2023 Nov 15. Nat Rev Microbiol. 2024. PMID: 37968359 Review.

3

Longitudinal gut microbiome changes in immune checkpoint blockade-treated advanced melanoma.

Björk JR, Bolte LA, Maltez Thomas A, Lee KA, Rossi N, Wind TT, Smit LM, Armanini F, Asnicar F, Blanco-Miguez A, Board R, Calbet-Llopart N, Derosa L, Dhomen N, Brooks K, Harland M, Harries M, Lorigan P, Manghi P, Marais R, Newton-Bishop J, Nezi L, Pinto F, Potrony M, Puig S, Serra-Bellver P, Shaw HM, Tamburini S, Valpione S, Waldron L, Zitvogel L, Zolfo M, de Vries EGE, Nathan P, Fehrmann RSN, Spector TD, Bataille V, Segata N, Hospers GAP, Weersma RK. Björk JR, et al. Among authors: waldron l. Nat Med. 2024 Mar;30(3):785-796. doi: 10.1038/s41591-024-02803-3. Epub 2024 Feb 16. Nat Med. 2024. PMID: 38365950 Free PMC article.

4

Robust global micro-RNA profiling with formalin-fixed paraffin-embedded breast cancer tissues.

Hui AB, Shi W, Boutros PC, Miller N, Pintilie M, Fyles T, McCready D, Wong D, Gerster K, Waldron L, Jurisica I, Penn LZ, Liu FF. Hui AB, et al. Among authors: waldron l. Lab Invest. 2009 May;89(5):597-606. doi: 10.1038/labinvest.2009.12. Epub 2009 Mar 16. Lab Invest. 2009. PMID: 19290006 Free article.

5

Comprehensive MicroRNA profiling for head and neck squamous cell carcinomas.

Hui AB, Lenarduzzi M, Krushel T, Waldron L, Pintilie M, Shi W, Perez-Ordonez B, Jurisica I, O'Sullivan B, Waldron J, Gullane P, Cummings B, Liu FF. Hui AB, et al. Among authors: waldron j, waldron l. Clin Cancer Res. 2010 Feb 15;16(4):1129-39. doi: 10.1158/1078-0432.CCR-09-2166. Epub 2010 Feb 9. Clin Cancer Res. 2010. PMID: 20145181

6

Optimization and analysis of a quantitative real-time PCR-based technique to determine microRNA expression in formalin-fixed paraffin-embedded samples.

Goswami RS, Waldron L, Machado J, Cervigne NK, Xu W, Reis PP, Bailey DJ, Jurisica I, Crump MR, Kamel-Reid S. Goswami RS, et al. Among authors: waldron l. BMC Biotechnol. 2010 Jun 23;10:47. doi: 10.1186/1472-6750-10-47. BMC Biotechnol. 2010. PMID: 20573258 Free PMC article.

7

mRNA transcript quantification in archival samples using multiplexed, color-coded probes.

Reis PP, Waldron L, Goswami RS, Xu W, Xuan Y, Perez-Ordonez B, Gullane P, Irish J, Jurisica I, Kamel-Reid S. Reis PP, et al. Among authors: waldron l. BMC Biotechnol. 2011 May 9;11:46. doi: 10.1186/1472-6750-11-46. BMC Biotechnol. 2011. PMID: 21549012 Free PMC article.

8

Metagenomic biomarker discovery and explanation.

Segata N, Izard J, Waldron L, Gevers D, Miropolsky L, Garrett WS, Huttenhower C. Segata N, et al. Among authors: waldron l. Genome Biol. 2011 Jun 24;12(6):R60. doi: 10.1186/gb-2011-12-6-r60. Genome Biol. 2011. PMID: 21702898 Free PMC article.

9

A gene signature in histologically normal surgical margins is predictive of oral carcinoma recurrence.

Reis PP, Waldron L, Perez-Ordonez B, Pintilie M, Galloni NN, Xuan Y, Cervigne NK, Warner GC, Makitie AA, Simpson C, Goldstein D, Brown D, Gilbert R, Gullane P, Irish J, Jurisica I, Kamel-Reid S. Reis PP, et al. Among authors: waldron l. BMC Cancer. 2011 Oct 11;11:437. doi: 10.1186/1471-2407-11-437. BMC Cancer. 2011. PMID: 21989116 Free PMC article.

10

Integrative approaches for microarray data analysis.

Waldron L, Coller HA, Huttenhower C. Waldron L, et al. Methods Mol Biol. 2012;802:157-82. doi: 10.1007/978-1-61779-400-1_11. Methods Mol Biol. 2012. PMID: 22130880

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