Pallen M - Search Results

1

Whole-genome sequence of the emerging pathogen Mycobacterium abscessus strain 47J26.

Chan J, Halachev M, Yates E, Smith G, Pallen M. Chan J, et al. Among authors: pallen m. J Bacteriol. 2012 Jan;194(2):549. doi: 10.1128/JB.06440-11. J Bacteriol. 2012. PMID: 22207751 Free PMC article.

2

Calculating orthologs in bacteria and Archaea: a divide and conquer approach.

Halachev MR, Loman NJ, Pallen MJ. Halachev MR, et al. PLoS One. 2011;6(12):e28388. doi: 10.1371/journal.pone.0028388. Epub 2011 Dec 12. PLoS One. 2011. PMID: 22174796 Free PMC article.

3

High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity.

Loman NJ, Constantinidou C, Chan JZ, Halachev M, Sergeant M, Penn CW, Robinson ER, Pallen MJ. Loman NJ, et al. Among authors: pallen mj. Nat Rev Microbiol. 2012 Sep;10(9):599-606. doi: 10.1038/nrmicro2850. Epub 2012 Aug 6. Nat Rev Microbiol. 2012. PMID: 22864262 Review.

4

Defining bacterial species in the genomic era: insights from the genus Acinetobacter.

Chan JZ, Halachev MR, Loman NJ, Constantinidou C, Pallen MJ. Chan JZ, et al. Among authors: pallen mj. BMC Microbiol. 2012 Dec 23;12:302. doi: 10.1186/1471-2180-12-302. BMC Microbiol. 2012. PMID: 23259572 Free PMC article.

5

Genome sequence of the emerging pathogen Helicobacter canadensis.

Loman NJ, Snyder LA, Linton JD, Langdon R, Lawson AJ, Weinstock GM, Wren BW, Pallen MJ. Loman NJ, et al. Among authors: pallen mj. J Bacteriol. 2009 Sep;191(17):5566-7. doi: 10.1128/JB.00729-09. Epub 2009 Jun 19. J Bacteriol. 2009. PMID: 19542273 Free PMC article.

6

Genomic epidemiology of a protracted hospital outbreak caused by multidrug-resistant Acinetobacter baumannii in Birmingham, England.

Halachev MR, Chan JZ, Constantinidou CI, Cumley N, Bradley C, Smith-Banks M, Oppenheim B, Pallen MJ. Halachev MR, et al. Among authors: pallen mj. Genome Med. 2014 Nov 20;6(11):70. doi: 10.1186/s13073-014-0070-x. eCollection 2014. Genome Med. 2014. PMID: 25414729 Free PMC article.

7

Clonal expansion within pneumococcal serotype 6C after use of seven-valent vaccine.

Loman NJ, Gladstone RA, Constantinidou C, Tocheva AS, Jefferies JM, Faust SN, O'Connor L, Chan J, Pallen MJ, Clarke SC. Loman NJ, et al. Among authors: pallen mj. PLoS One. 2013 May 28;8(5):e64731. doi: 10.1371/journal.pone.0064731. Print 2013. PLoS One. 2013. PMID: 23724086 Free PMC article.

8

A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of Shiga-toxigenic Escherichia coli O104:H4.

Loman NJ, Constantinidou C, Christner M, Rohde H, Chan JZ, Quick J, Weir JC, Quince C, Smith GP, Betley JR, Aepfelbacher M, Pallen MJ. Loman NJ, et al. Among authors: pallen mj. JAMA. 2013 Apr 10;309(14):1502-10. doi: 10.1001/jama.2013.3231. JAMA. 2013. PMID: 23571589

9

Deletion of TnAbaR23 results in both expected and unexpected antibiogram changes in a multidrug-resistant Acinetobacter baumannii strain.

Kochar M, Crosatti M, Harrison EM, Rieck B, Chan J, Constantinidou C, Pallen M, Ou HY, Rajakumar K. Kochar M, et al. Among authors: pallen m. Antimicrob Agents Chemother. 2012 Apr;56(4):1845-53. doi: 10.1128/AAC.05334-11. Epub 2012 Jan 30. Antimicrob Agents Chemother. 2012. PMID: 22290963 Free PMC article.

10

Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe.

Kay GL, Sergeant MJ, Zhou Z, Chan JZ, Millard A, Quick J, Szikossy I, Pap I, Spigelman M, Loman NJ, Achtman M, Donoghue HD, Pallen MJ. Kay GL, et al. Among authors: pallen mj. Nat Commun. 2015 Apr 7;6:6717. doi: 10.1038/ncomms7717. Nat Commun. 2015. PMID: 25848958 Free PMC article.

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