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Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications.
Acera Mateos P, J Sethi A, Ravindran A, Srivastava A, Woodward K, Mahmud S, Kanchi M, Guarnacci M, Xu J, W S Yuen Z, Zhou Y, Sneddon A, Hamilton W, Gao J, M Starrs L, Hayashi R, Wickramasinghe V, Zarnack K, Preiss T, Burgio G, Dehorter N, E Shirokikh N, Eyras E. Acera Mateos P, et al. Among authors: eyras e. Nat Commun. 2024 May 9;15(1):3899. doi: 10.1038/s41467-024-47953-7. Nat Commun. 2024. PMID: 38724548 Free PMC article.
A convergent malignant phenotype in B-cell acute lymphoblastic leukemia involving the splicing factor SRRM1.
Closa A, Reixachs-Solé M, Fuentes-Fayos AC, Hayer KE, Melero JL, Adriaanse FRS, Bos RS, Torres-Diz M, Hunger SP, Roberts KG, Mullighan CG, Stam RW, Thomas-Tikhonenko A, Castaño JP, Luque RM, Eyras E. Closa A, et al. Among authors: eyras e. NAR Cancer. 2022 Dec 9;4(4):zcac041. doi: 10.1093/narcan/zcac041. eCollection 2022 Dec. NAR Cancer. 2022. PMID: 36518527 Free PMC article.
Nucleosome-driven transcription factor binding and gene regulation.
Ballaré C, Castellano G, Gaveglia L, Althammer S, González-Vallinas J, Eyras E, Le Dily F, Zaurin R, Soronellas D, Vicent GP, Beato M. Ballaré C, et al. Among authors: eyras e. Mol Cell. 2013 Jan 10;49(1):67-79. doi: 10.1016/j.molcel.2012.10.019. Epub 2012 Nov 21. Mol Cell. 2013. PMID: 23177737 Free article.
Preferential binding of a stable G3BP ribonucleoprotein complex to intron-retaining transcripts in mouse brain and modulation of their expression in the cerebellum.
Martin S, Bellora N, González-Vallinas J, Irimia M, Chebli K, de Toledo M, Raabe M, Eyras E, Urlaub H, Blencowe BJ, Tazi J. Martin S, et al. Among authors: eyras e. J Neurochem. 2016 Nov;139(3):349-368. doi: 10.1111/jnc.13768. Epub 2016 Oct 18. J Neurochem. 2016. PMID: 27513819 Free article.
101 results