Donald JE - Search Results

1

Neutralizing epitopes in the membrane-proximal external region of HIV-1 gp41 are influenced by the transmembrane domain and the plasma membrane.

Montero M, Gulzar N, Klaric KA, Donald JE, Lepik C, Wu S, Tsai S, Julien JP, Hessell AJ, Wang S, Lu S, Burton DR, Pai EF, Degrado WF, Scott JK. Montero M, et al. Among authors: donald je. J Virol. 2012 Mar;86(6):2930-41. doi: 10.1128/JVI.06349-11. Epub 2012 Jan 11. J Virol. 2012. PMID: 22238313 Free PMC article.

2

Functional analysis of the transmembrane domain in paramyxovirus F protein-mediated membrane fusion.

Bissonnette ML, Donald JE, DeGrado WF, Jardetzky TS, Lamb RA. Bissonnette ML, et al. Among authors: donald je. J Mol Biol. 2009 Feb 13;386(1):14-36. doi: 10.1016/j.jmb.2008.12.029. Epub 2008 Dec 24. J Mol Biol. 2009. PMID: 19121325 Free PMC article.

3

Salt bridges: geometrically specific, designable interactions.

Donald JE, Kulp DW, DeGrado WF. Donald JE, et al. Proteins. 2011 Mar;79(3):898-915. doi: 10.1002/prot.22927. Epub 2011 Jan 5. Proteins. 2011. PMID: 21287621 Free PMC article.

4

Identification of interacting hot spots in the beta3 integrin stalk using comprehensive interface design.

Donald JE, Zhu H, Litvinov RI, DeGrado WF, Bennett JS. Donald JE, et al. J Biol Chem. 2010 Dec 3;285(49):38658-65. doi: 10.1074/jbc.M110.170670. Epub 2010 Oct 7. J Biol Chem. 2010. PMID: 20929856 Free PMC article.

5

Knowledge-based potential for positioning membrane-associated structures and assessing residue-specific energetic contributions.

Schramm CA, Hannigan BT, Donald JE, Keasar C, Saven JG, Degrado WF, Samish I. Schramm CA, et al. Among authors: donald je. Structure. 2012 May 9;20(5):924-35. doi: 10.1016/j.str.2012.03.016. Structure. 2012. PMID: 22579257 Free PMC article.

6

Transmembrane orientation and possible role of the fusogenic peptide from parainfluenza virus 5 (PIV5) in promoting fusion.

Donald JE, Zhang Y, Fiorin G, Carnevale V, Slochower DR, Gai F, Klein ML, DeGrado WF. Donald JE, et al. Proc Natl Acad Sci U S A. 2011 Mar 8;108(10):3958-63. doi: 10.1073/pnas.1019668108. Epub 2011 Feb 14. Proc Natl Acad Sci U S A. 2011. PMID: 21321234 Free PMC article.

7

Capture and imaging of a prehairpin fusion intermediate of the paramyxovirus PIV5.

Kim YH, Donald JE, Grigoryan G, Leser GP, Fadeev AY, Lamb RA, DeGrado WF. Kim YH, et al. Among authors: donald je. Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):20992-7. doi: 10.1073/pnas.1116034108. Epub 2011 Dec 16. Proc Natl Acad Sci U S A. 2011. PMID: 22178759 Free PMC article.

8

Structural informatics, modeling, and design with an open-source Molecular Software Library (MSL).

Kulp DW, Subramaniam S, Donald JE, Hannigan BT, Mueller BK, Grigoryan G, Senes A. Kulp DW, et al. Among authors: donald je. J Comput Chem. 2012 Jul 30;33(20):1645-61. doi: 10.1002/jcc.22968. Epub 2012 May 8. J Comput Chem. 2012. PMID: 22565567 Free PMC article.

9

SDR: a database of predicted specificity-determining residues in proteins.

Donald JE, Shakhnovich EI. Donald JE, et al. Nucleic Acids Res. 2009 Jan;37(Database issue):D191-4. doi: 10.1093/nar/gkn716. Epub 2008 Oct 16. Nucleic Acids Res. 2009. PMID: 18927118 Free PMC article.

10

Mutation in the Fe-S scaffold protein Isu bypasses frataxin deletion.

Yoon H, Golla R, Lesuisse E, Pain J, Donald JE, Lyver ER, Pain D, Dancis A. Yoon H, et al. Among authors: donald je. Biochem J. 2012 Jan 1;441(1):473-80. doi: 10.1042/BJ20111637. Biochem J. 2012. PMID: 21936771 Free PMC article.

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