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Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation.
Li G, Ruan X, Auerbach RK, Sandhu KS, Zheng M, Wang P, Poh HM, Goh Y, Lim J, Zhang J, Sim HS, Peh SQ, Mulawadi FH, Ong CT, Orlov YL, Hong S, Zhang Z, Landt S, Raha D, Euskirchen G, Wei CL, Ge W, Wang H, Davis C, Fisher-Aylor KI, Mortazavi A, Gerstein M, Gingeras T, Wold B, Sun Y, Fullwood MJ, Cheung E, Liu E, Sung WK, Snyder M, Ruan Y. Li G, et al. Among authors: zheng m. Cell. 2012 Jan 20;148(1-2):84-98. doi: 10.1016/j.cell.2011.12.014. Cell. 2012. PMID: 22265404 Free PMC article.
CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription.
Tang Z, Luo OJ, Li X, Zheng M, Zhu JJ, Szalaj P, Trzaskoma P, Magalska A, Wlodarczyk J, Ruszczycki B, Michalski P, Piecuch E, Wang P, Wang D, Tian SZ, Penrad-Mobayed M, Sachs LM, Ruan X, Wei CL, Liu ET, Wilczynski GM, Plewczynski D, Li G, Ruan Y. Tang Z, et al. Among authors: zheng m. Cell. 2015 Dec 17;163(7):1611-27. doi: 10.1016/j.cell.2015.11.024. Epub 2015 Dec 10. Cell. 2015. PMID: 26686651 Free PMC article.
Multiplex chromatin interactions with single-molecule precision.
Zheng M, Tian SZ, Capurso D, Kim M, Maurya R, Lee B, Piecuch E, Gong L, Zhu JJ, Li Z, Wong CH, Ngan CY, Wang P, Ruan X, Wei CL, Ruan Y. Zheng M, et al. Nature. 2019 Feb;566(7745):558-562. doi: 10.1038/s41586-019-0949-1. Epub 2019 Feb 18. Nature. 2019. PMID: 30778195 Free PMC article.
3D chromatin structures associated with ncRNA roX2 for hyperactivation and coactivation across the entire X chromosome.
Tian SZ, Yang Y, Ning D, Fang K, Jing K, Huang G, Xu Y, Yin P, Huang H, Chen G, Deng Y, Zhang S, Zhang Z, Chen Z, Gao T, Chen W, Li G, Tian R, Ruan Y, Li Y, Zheng M. Tian SZ, et al. Among authors: zheng m. Sci Adv. 2024 Jul 26;10(30):eado5716. doi: 10.1126/sciadv.ado5716. Epub 2024 Jul 26. Sci Adv. 2024. PMID: 39058769 Free PMC article.
9,499 results