Caves LS - Search Results

1

Peptide inhibitors of viral assembly: a novel route to broad-spectrum antivirals.

ElSawy KM, Twarock R, Verma CS, Caves LS. ElSawy KM, et al. Among authors: caves ls. J Chem Inf Model. 2012 Mar 26;52(3):770-6. doi: 10.1021/ci200467s. Epub 2012 Mar 6. J Chem Inf Model. 2012. PMID: 22390317

2

The impact of viral RNA on the association rates of capsid protein assembly: bacteriophage MS2 as a case study.

Elsawy KM, Caves LS, Twarock R. Elsawy KM, et al. Among authors: caves ls. J Mol Biol. 2010 Jul 23;400(4):935-47. doi: 10.1016/j.jmb.2010.05.037. Epub 2010 May 24. J Mol Biol. 2010. PMID: 20562027

3

On the interaction mechanisms of a p53 peptide and nutlin with the MDM2 and MDMX proteins: a Brownian dynamics study.

ElSawy KM, Verma CS, Joseph TL, Lane DP, Twarock R, Caves LS. ElSawy KM, et al. Among authors: caves ls. Cell Cycle. 2013 Feb 1;12(3):394-404. doi: 10.4161/cc.23511. Epub 2013 Jan 16. Cell Cycle. 2013. PMID: 23324352 Free PMC article.

4

On the origin of the stereoselective affinity of Nutlin-3 geometrical isomers for the MDM2 protein.

ElSawy KM, Verma CS, Lane DP, Caves LS. ElSawy KM, et al. Among authors: caves ls. Cell Cycle. 2013 Dec 15;12(24):3727-35. doi: 10.4161/cc.27273. Epub 2013 Nov 21. Cell Cycle. 2013. PMID: 24270847 Free PMC article.

5

A spatiotemporal characterization of the effect of p53 phosphorylation on its interaction with MDM2.

ElSawy KM, Sim A, Lane DP, Verma CS, Caves LS. ElSawy KM, et al. Among authors: caves ls. Cell Cycle. 2015;14(2):179-88. doi: 10.4161/15384101.2014.989043. Cell Cycle. 2015. PMID: 25584963 Free PMC article.

6

Recognition Dynamics of p53 and MDM2: Implications for Peptide Design.

ElSawy KM, Lane DP, Verma CS, Caves LS. ElSawy KM, et al. Among authors: caves ls. J Phys Chem B. 2016 Jan 21;120(2):320-8. doi: 10.1021/acs.jpcb.5b11162. Epub 2016 Jan 11. J Phys Chem B. 2016. PMID: 26701330

7

Disruption of 3CLpro protease self-association by short peptides as a potential route to broad spectrum coronavirus inhibitors.

ElSawy KM, Alminderej FM, Caves LSD. ElSawy KM, et al. Among authors: caves lsd. J Biomol Struct Dyn. 2022;40(24):13901-13911. doi: 10.1080/07391102.2021.1996462. Epub 2021 Nov 1. J Biomol Struct Dyn. 2022. PMID: 34720051

8

The physical determinants of the DNA conformational landscape: an analysis of the potential energy surface of single-strand dinucleotides in the conformational space of duplex DNA.

Elsawy KM, Hodgson MK, Caves LS. Elsawy KM, et al. Among authors: caves ls. Nucleic Acids Res. 2005 Oct 7;33(18):5749-62. doi: 10.1093/nar/gki888. Print 2005. Nucleic Acids Res. 2005. PMID: 16214808 Free PMC article.

9

On the origin of order in the genome organization of ssRNA viruses.

ElSawy KM, Caves LS, Twarock R. ElSawy KM, et al. Among authors: caves ls. Biophys J. 2011 Aug 17;101(4):774-80. doi: 10.1016/j.bpj.2011.07.005. Biophys J. 2011. PMID: 21843467 Free PMC article.

10

Congruent qualitative behavior of complete and reconstructed phase space trajectories from biomolecular dynamics simulation.

Caves LS, Verma CS. Caves LS, et al. Proteins. 2002 Apr 1;47(1):25-30. Proteins. 2002. PMID: 11870862

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