Wan J - Search Results

1

Transcriptome analysis using next generation sequencing reveals molecular signatures of diabetic retinopathy and efficacy of candidate drugs.

Kandpal RP, Rajasimha HK, Brooks MJ, Nellissery J, Wan J, Qian J, Kern TS, Swaroop A. Kandpal RP, et al. Among authors: wan j. Mol Vis. 2012;18:1123-46. Epub 2012 May 2. Mol Vis. 2012. PMID: 22605924 Free PMC article.

2

Relating periodicity of nucleosome organization and gene regulation.

Wan J, Lin J, Zack DJ, Qian J. Wan J, et al. Bioinformatics. 2009 Jul 15;25(14):1782-8. doi: 10.1093/bioinformatics/btp323. Epub 2009 May 15. Bioinformatics. 2009. PMID: 19447785 Free PMC article.

3

MicroRNA profile of the developing mouse retina.

Hackler L Jr, Wan J, Swaroop A, Qian J, Zack DJ. Hackler L Jr, et al. Among authors: wan j. Invest Ophthalmol Vis Sci. 2010 Apr;51(4):1823-31. doi: 10.1167/iovs.09-4657. Epub 2009 Nov 20. Invest Ophthalmol Vis Sci. 2010. PMID: 19933188 Free PMC article.

4

Computational analysis of tissue-specific gene networks: application to murine retinal functional studies.

Hu J, Wan J, Hackler L Jr, Zack DJ, Qian J. Hu J, et al. Among authors: wan j. Bioinformatics. 2010 Sep 15;26(18):2289-97. doi: 10.1093/bioinformatics/btq408. Epub 2010 Jul 8. Bioinformatics. 2010. PMID: 20616386 Free PMC article.

5

Dynamic usage of alternative splicing exons during mouse retina development.

Wan J, Masuda T, Hackler L Jr, Torres KM, Merbs SL, Zack DJ, Qian J. Wan J, et al. Nucleic Acids Res. 2011 Oct;39(18):7920-30. doi: 10.1093/nar/gkr545. Epub 2011 Jun 30. Nucleic Acids Res. 2011. PMID: 21724604 Free PMC article.

6

A novel methyl-binding domain protein enrichment method for identifying genome-wide tissue-specific DNA methylation from nanogram DNA samples.

Oliver VF, Wan J, Agarwal S, Zack DJ, Qian J, Merbs SL. Oliver VF, et al. Among authors: wan j. Epigenetics Chromatin. 2013 Jun 7;6(1):17. doi: 10.1186/1756-8935-6-17. Epigenetics Chromatin. 2013. PMID: 23759032 Free PMC article.

7

Integrative analysis of tissue-specific methylation and alternative splicing identifies conserved transcription factor binding motifs.

Wan J, Oliver VF, Zhu H, Zack DJ, Qian J, Merbs SL. Wan J, et al. Nucleic Acids Res. 2013 Oct;41(18):8503-14. doi: 10.1093/nar/gkt652. Epub 2013 Jul 24. Nucleic Acids Res. 2013. PMID: 23887936 Free PMC article.

8

Oxidative stress induces mitochondrial dysfunction and a protective unfolded protein response in RPE cells.

Cano M, Wang L, Wan J, Barnett BP, Ebrahimi K, Qian J, Handa JT. Cano M, et al. Among authors: wan j. Free Radic Biol Med. 2014 Apr;69:1-14. doi: 10.1016/j.freeradbiomed.2014.01.004. Epub 2014 Jan 14. Free Radic Biol Med. 2014. PMID: 24434119 Free PMC article.

9

The transcription factor GTF2IRD1 regulates the topology and function of photoreceptors by modulating photoreceptor gene expression across the retina.

Masuda T, Zhang X, Berlinicke C, Wan J, Yerrabelli A, Conner EA, Kjellstrom S, Bush R, Thorgeirsson SS, Swaroop A, Chen S, Zack DJ. Masuda T, et al. Among authors: wan j. J Neurosci. 2014 Nov 12;34(46):15356-68. doi: 10.1523/JNEUROSCI.2089-14.2014. J Neurosci. 2014. PMID: 25392503 Free PMC article.

10

Characterization of tissue-specific differential DNA methylation suggests distinct modes of positive and negative gene expression regulation.

Wan J, Oliver VF, Wang G, Zhu H, Zack DJ, Merbs SL, Qian J. Wan J, et al. BMC Genomics. 2015 Feb 5;16(1):49. doi: 10.1186/s12864-015-1271-4. BMC Genomics. 2015. PMID: 25652663 Free PMC article.

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