Takayama Y - Search Results

1

Impact of protein/protein interactions on global intermolecular translocation rates of the transcription factors Sox2 and Oct1 between DNA cognate sites analyzed by z-exchange NMR spectroscopy.

Takayama Y, Clore GM. Takayama Y, et al. J Biol Chem. 2012 Aug 3;287(32):26962-70. doi: 10.1074/jbc.M112.382960. Epub 2012 Jun 20. J Biol Chem. 2012. PMID: 22718759 Free PMC article.

2

Intra- and intermolecular translocation of the bi-domain transcription factor Oct1 characterized by liquid crystal and paramagnetic NMR.

Takayama Y, Clore GM. Takayama Y, et al. Proc Natl Acad Sci U S A. 2011 May 31;108(22):E169-76. doi: 10.1073/pnas.1100050108. Epub 2011 May 9. Proc Natl Acad Sci U S A. 2011. PMID: 21555551 Free PMC article.

3

Interplay between minor and major groove-binding transcription factors Sox2 and Oct1 in translocation on DNA studied by paramagnetic and diamagnetic NMR.

Takayama Y, Clore GM. Takayama Y, et al. J Biol Chem. 2012 Apr 27;287(18):14349-63. doi: 10.1074/jbc.M112.352864. Epub 2012 Mar 6. J Biol Chem. 2012. PMID: 22396547 Free PMC article.

4

Structure of the Plasmodium 6-cysteine s48/45 domain.

Arredondo SA, Cai M, Takayama Y, MacDonald NJ, Anderson DE, Aravind L, Clore GM, Miller LH. Arredondo SA, et al. Among authors: takayama y. Proc Natl Acad Sci U S A. 2012 Apr 24;109(17):6692-7. doi: 10.1073/pnas.1204363109. Epub 2012 Apr 9. Proc Natl Acad Sci U S A. 2012. PMID: 22493233 Free PMC article.

5

Solution structure of the 128 kDa enzyme I dimer from Escherichia coli and its 146 kDa complex with HPr using residual dipolar couplings and small- and wide-angle X-ray scattering.

Schwieters CD, Suh JY, Grishaev A, Ghirlando R, Takayama Y, Clore GM. Schwieters CD, et al. Among authors: takayama y. J Am Chem Soc. 2010 Sep 22;132(37):13026-45. doi: 10.1021/ja105485b. J Am Chem Soc. 2010. PMID: 20731394 Free PMC article.

6

Combined use of residual dipolar couplings and solution X-ray scattering to rapidly probe rigid-body conformational transitions in a non-phosphorylatable active-site mutant of the 128 kDa enzyme I dimer.

Takayama Y, Schwieters CD, Grishaev A, Ghirlando R, Clore GM. Takayama Y, et al. J Am Chem Soc. 2011 Jan 26;133(3):424-7. doi: 10.1021/ja109866w. Epub 2010 Dec 16. J Am Chem Soc. 2011. PMID: 21162528 Free PMC article.

7

Blue Light-excited Light-Oxygen-Voltage-sensing Domain 2 (LOV2) Triggers a Rearrangement of the Kinase Domain to Induce Phosphorylation Activity in Arabidopsis Phototropin1.

Oide M, Okajima K, Kashojiya S, Takayama Y, Oroguchi T, Hikima T, Yamamoto M, Nakasako M. Oide M, et al. Among authors: takayama y. J Biol Chem. 2016 Sep 16;291(38):19975-84. doi: 10.1074/jbc.M116.735787. Epub 2016 Aug 2. J Biol Chem. 2016. PMID: 27484797 Free PMC article.

8

NMR studies of translocation of the Zif268 protein between its target DNA Sites.

Takayama Y, Sahu D, Iwahara J. Takayama Y, et al. Biochemistry. 2010 Sep 21;49(37):7998-8005. doi: 10.1021/bi100962h. Biochemistry. 2010. PMID: 20718505

9

Asymmetrical roles of zinc fingers in dynamic DNA-scanning process by the inducible transcription factor Egr-1.

Zandarashvili L, Vuzman D, Esadze A, Takayama Y, Sahu D, Levy Y, Iwahara J. Zandarashvili L, et al. Among authors: takayama y. Proc Natl Acad Sci U S A. 2012 Jun 26;109(26):E1724-32. doi: 10.1073/pnas.1121500109. Epub 2012 Jun 6. Proc Natl Acad Sci U S A. 2012. PMID: 22675124 Free PMC article.

10

Light-induced conformational changes of LOV1 (light oxygen voltage-sensing domain 1) and LOV2 relative to the kinase domain and regulation of kinase activity in Chlamydomonas phototropin.

Okajima K, Aihara Y, Takayama Y, Nakajima M, Kashojiya S, Hikima T, Oroguchi T, Kobayashi A, Sekiguchi Y, Yamamoto M, Suzuki T, Nagatani A, Nakasako M, Tokutomi S. Okajima K, et al. Among authors: takayama y. J Biol Chem. 2014 Jan 3;289(1):413-22. doi: 10.1074/jbc.M113.515403. Epub 2013 Nov 27. J Biol Chem. 2014. PMID: 24285544 Free PMC article.

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