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Genome sequences for five strains of the emerging pathogen Haemophilus haemolyticus.
Jordan IK, Conley AB, Antonov IV, Arthur RA, Cook ED, Cooper GP, Jones BL, Knipe KM, Lee KJ, Liu X, Mitchell GJ, Pande PR, Petit RA, Qin S, Rajan VN, Sarda S, Sebastian A, Tang S, Thapliyal R, Varghese NJ, Ye T, Katz LS, Wang X, Rowe L, Frace M, Mayer LW. Jordan IK, et al. Among authors: varghese nj. J Bacteriol. 2011 Oct;193(20):5879-80. doi: 10.1128/JB.05863-11. J Bacteriol. 2011. PMID: 21952546 Free PMC article.
Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence.
Yassin AF, Langenberg S, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Mukherjee S, Reddy TBK, Daum C, Shapiro N, Ivanova N, Woyke T, Kyrpides NC. Yassin AF, et al. Among authors: varghese n. PLoS One. 2017 Dec 7;12(12):e0188914. doi: 10.1371/journal.pone.0188914. eCollection 2017. PLoS One. 2017. PMID: 29216246 Free PMC article.
Microbial species delineation using whole genome sequences.
Varghese NJ, Mukherjee S, Ivanova N, Konstantinidis KT, Mavrommatis K, Kyrpides NC, Pati A. Varghese NJ, et al. Nucleic Acids Res. 2015 Aug 18;43(14):6761-71. doi: 10.1093/nar/gkv657. Epub 2015 Jul 6. Nucleic Acids Res. 2015. PMID: 26150420 Free PMC article.
Absence of genome reduction in diverse, facultative endohyphal bacteria.
Baltrus DA, Dougherty K, Arendt KR, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Ngan CY, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Arnold AE. Baltrus DA, et al. Among authors: varghese n. Microb Genom. 2017 Feb 28;3(2):e000101. doi: 10.1099/mgen.0.000101. eCollection 2017 Feb. Microb Genom. 2017. PMID: 28348879 Free PMC article.
High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1T Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism.
Hedlund BP, Murugapiran SK, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Ngan CY, Daum C, Duffy K, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Williams AJ, Cole JK, Dodsworth JA, Woyke T. Hedlund BP, et al. Among authors: varghese n. Genome Announc. 2015 Dec 3;3(6):e01410-15. doi: 10.1128/genomeA.01410-15. Genome Announc. 2015. PMID: 26634758 Free PMC article.
High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409(T) with an incomplete denitrification pathway.
Zhou EM, Murugapiran SK, Mefferd CC, Liu L, Xian WD, Yin YR, Ming H, Yu TT, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Ngan CY, Daum C, Shapiro N, Markowitz V, Ivanova N, Spunde A, Kyrpides N, Woyke T, Li WJ, Hedlund BP. Zhou EM, et al. Among authors: varghese n. Stand Genomic Sci. 2016 Feb 27;11:20. doi: 10.1186/s40793-016-0140-3. eCollection 2016. Stand Genomic Sci. 2016. PMID: 26925197 Free PMC article.
276 results