Eng JK - Search Results

1

De novo correction of mass measurement error in low resolution tandem MS spectra for shotgun proteomics.

Egertson JD, Eng JK, Bereman MS, Hsieh EJ, Merrihew GE, MacCoss MJ. Egertson JD, et al. Among authors: eng jk. J Am Soc Mass Spectrom. 2012 Dec;23(12):2075-82. doi: 10.1007/s13361-012-0482-z. Epub 2012 Sep 25. J Am Soc Mass Spectrom. 2012. PMID: 23007965 Free PMC article.

2

Direct database searching with MALDI-PSD spectra of peptides.

Griffin PR, MacCoss MJ, Eng JK, Blevins RA, Aaronson JS, Yates JR 3rd. Griffin PR, et al. Among authors: eng jk. Rapid Commun Mass Spectrom. 1995;9(15):1546-51. doi: 10.1002/rcm.1290091515. Rapid Commun Mass Spectrom. 1995. PMID: 8652878

3

Code developments to improve the efficiency of automated MS/MS spectra interpretation.

Sadygov RG, Eng J, Durr E, Saraf A, McDonald H, MacCoss MJ, Yates JR 3rd. Sadygov RG, et al. J Proteome Res. 2002 May-Jun;1(3):211-5. doi: 10.1021/pr015514r. J Proteome Res. 2002. PMID: 12645897

4

Proteomic analysis of Pseudomonas aeruginosa grown under magnesium limitation.

Guina T, Wu M, Miller SI, Purvine SO, Yi EC, Eng J, Goodlett DR, Aebersold R, Ernst RK, Lee KA. Guina T, et al. J Am Soc Mass Spectrom. 2003 Jul;14(7):742-51. doi: 10.1016/S1044-0305(03)00133-8. J Am Soc Mass Spectrom. 2003. PMID: 12837596 Free article.

5

A fast SEQUEST cross correlation algorithm.

Eng JK, Fischer B, Grossmann J, Maccoss MJ. Eng JK, et al. J Proteome Res. 2008 Oct;7(10):4598-602. doi: 10.1021/pr800420s. Epub 2008 Sep 6. J Proteome Res. 2008. PMID: 18774840

6

Proteomics data repositories.

Riffle M, Eng JK. Riffle M, et al. Among authors: eng jk. Proteomics. 2009 Oct;9(20):4653-63. doi: 10.1002/pmic.200900216. Proteomics. 2009. PMID: 19795424 Free PMC article. Review.

7

Precursor charge state prediction for electron transfer dissociation tandem mass spectra.

Sharma V, Eng JK, Feldman S, von Haller PD, MacCoss MJ, Noble WS. Sharma V, et al. Among authors: eng jk. J Proteome Res. 2010 Oct 1;9(10):5438-44. doi: 10.1021/pr1006685. J Proteome Res. 2010. PMID: 20731383 Free PMC article.

8

Fast parallel tandem mass spectral library searching using GPU hardware acceleration.

Baumgardner LA, Shanmugam AK, Lam H, Eng JK, Martin DB. Baumgardner LA, et al. Among authors: eng jk. J Proteome Res. 2011 Jun 3;10(6):2882-8. doi: 10.1021/pr200074h. Epub 2011 May 5. J Proteome Res. 2011. PMID: 21545112 Free PMC article.

9

iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates.

Shteynberg D, Deutsch EW, Lam H, Eng JK, Sun Z, Tasman N, Mendoza L, Moritz RL, Aebersold R, Nesvizhskii AI. Shteynberg D, et al. Among authors: eng jk. Mol Cell Proteomics. 2011 Dec;10(12):M111.007690. doi: 10.1074/mcp.M111.007690. Epub 2011 Aug 29. Mol Cell Proteomics. 2011. PMID: 21876204 Free PMC article.

10

Accurate peptide fragment mass analysis: multiplexed peptide identification and quantification.

Weisbrod CR, Eng JK, Hoopmann MR, Baker T, Bruce JE. Weisbrod CR, et al. Among authors: eng jk. J Proteome Res. 2012 Mar 2;11(3):1621-32. doi: 10.1021/pr2008175. Epub 2012 Feb 21. J Proteome Res. 2012. PMID: 22288382 Free PMC article.

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