Karplus M - Search Results

1

Dynamics of myoglobin: comparison of simulation results with neutron scattering spectra.

Smith J, Kuczera K, Karplus M. Smith J, et al. Among authors: karplus m. Proc Natl Acad Sci U S A. 1990 Feb;87(4):1601-5. doi: 10.1073/pnas.87.4.1601. Proc Natl Acad Sci U S A. 1990. PMID: 2304919 Free PMC article.

2

Free energy of sickling: A simulation analysis.

Kuczera K, Gao J, Tidor B, Karplus M. Kuczera K, et al. Among authors: karplus m. Proc Natl Acad Sci U S A. 1990 Nov;87(21):8481-5. doi: 10.1073/pnas.87.21.8481. Proc Natl Acad Sci U S A. 1990. PMID: 2236057 Free PMC article.

3

Temperature dependence of the structure and dynamics of myoglobin. A simulation approach.

Kuczera K, Kuriyan J, Karplus M. Kuczera K, et al. Among authors: karplus m. J Mol Biol. 1990 May 20;213(2):351-73. doi: 10.1016/S0022-2836(05)80196-2. J Mol Biol. 1990. PMID: 2342112

4

Nonexponential relaxation after ligand dissociation from myoglobin: a molecular dynamics simulation.

Kuczera K, Lambry JC, Martin JL, Karplus M. Kuczera K, et al. Among authors: karplus m. Proc Natl Acad Sci U S A. 1993 Jun 15;90(12):5805-7. doi: 10.1073/pnas.90.12.5805. Proc Natl Acad Sci U S A. 1993. PMID: 8516332 Free PMC article.

5

All-atom empirical potential for molecular modeling and dynamics studies of proteins.

MacKerell AD, Bashford D, Bellott M, Dunbrack RL, Evanseck JD, Field MJ, Fischer S, Gao J, Guo H, Ha S, Joseph-McCarthy D, Kuchnir L, Kuczera K, Lau FT, Mattos C, Michnick S, Ngo T, Nguyen DT, Prodhom B, Reiher WE, Roux B, Schlenkrich M, Smith JC, Stote R, Straub J, Watanabe M, Wiórkiewicz-Kuczera J, Yin D, Karplus M. MacKerell AD, et al. Among authors: karplus m. J Phys Chem B. 1998 Apr 30;102(18):3586-616. doi: 10.1021/jp973084f. J Phys Chem B. 1998. PMID: 24889800

6

Inelastic neutron scattering analysis of picosecond internal protein dynamics. Comparison of harmonic theory with experiment.

Cusack S, Smith J, Finney J, Tidor B, Karplus M. Cusack S, et al. Among authors: karplus m. J Mol Biol. 1988 Aug 20;202(4):903-8. doi: 10.1016/0022-2836(88)90566-9. J Mol Biol. 1988. PMID: 2459399

7

Hidden thermodynamics of mutant proteins: a molecular dynamics analysis.

Gao J, Kuczera K, Tidor B, Karplus M. Gao J, et al. Among authors: karplus m. Science. 1989 Jun 2;244(4908):1069-72. doi: 10.1126/science.2727695. Science. 1989. PMID: 2727695

8

Ligand binding and protein relaxation in heme proteins: a room temperature analysis of NO geminate recombination.

Petrich JW, Lambry JC, Kuczera K, Karplus M, Poyart C, Martin JL. Petrich JW, et al. Among authors: karplus m. Biochemistry. 1991 Apr 23;30(16):3975-87. doi: 10.1021/bi00230a025. Biochemistry. 1991. PMID: 2018766

9

Molecular dynamics and protein function.

Karplus M, Kuriyan J. Karplus M, et al. Proc Natl Acad Sci U S A. 2005 May 10;102(19):6679-85. doi: 10.1073/pnas.0408930102. Epub 2005 May 3. Proc Natl Acad Sci U S A. 2005. PMID: 15870208 Free PMC article.

10

Molecular dynamics simulation of protein denaturation: solvation of the hydrophobic cores and secondary structure of barnase.

Caflisch A, Karplus M. Caflisch A, et al. Among authors: karplus m. Proc Natl Acad Sci U S A. 1994 Mar 1;91(5):1746-50. doi: 10.1073/pnas.91.5.1746. Proc Natl Acad Sci U S A. 1994. PMID: 8127876 Free PMC article.

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