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All-atom protein folding with free-energy forcefields.
Verma A, Gopal SM, Schug A, Herges T, Klenin K, Wenzel W. Verma A, et al. Among authors: gopal sm. Prog Mol Biol Transl Sci. 2008;83:181-253. doi: 10.1016/S0079-6603(08)00605-3. Prog Mol Biol Transl Sci. 2008. PMID: 19186255 Review. No abstract available.
Molecular dynamics trajectory compression with a coarse-grained model.
Cheng YM, Gopal SM, Law SM, Feig M. Cheng YM, et al. Among authors: gopal sm. IEEE/ACM Trans Comput Biol Bioinform. 2012;9(2):476-86. doi: 10.1109/TCBB.2011.141. Epub 2011 Oct 17. IEEE/ACM Trans Comput Biol Bioinform. 2012. PMID: 22025759 Free PMC article.
PRIMO: A Transferable Coarse-grained Force Field for Proteins.
Kar P, Gopal SM, Cheng YM, Predeus A, Feig M. Kar P, et al. Among authors: gopal sm. J Chem Theory Comput. 2013 Aug 13;9(8):3769-3788. doi: 10.1021/ct400230y. J Chem Theory Comput. 2013. PMID: 23997693 Free PMC article.
17 results