Serpedin E - Search Results

1

Reducing confounding and suppression effects in TCGA data: an integrated analysis of chemotherapy response in ovarian cancer.

Hsu FH, Serpedin E, Hsiao TH, Bishop AJ, Dougherty ER, Chen Y. Hsu FH, et al. Among authors: serpedin e. BMC Genomics. 2012;13 Suppl 6(Suppl 6):S13. doi: 10.1186/1471-2164-13-S6-S13. Epub 2012 Oct 26. BMC Genomics. 2012. PMID: 23134756 Free PMC article.

2

Inferring gene regulatory networks from time series data using the minimum description length principle.

Zhao W, Serpedin E, Dougherty ER. Zhao W, et al. Among authors: serpedin e. Bioinformatics. 2006 Sep 1;22(17):2129-35. doi: 10.1093/bioinformatics/btl364. Epub 2006 Jul 15. Bioinformatics. 2006. PMID: 16845143

3

Inferring connectivity of genetic regulatory networks using information-theoretic criteria.

Zhao W, Serpedin E, Dougherty ER. Zhao W, et al. Among authors: serpedin e. IEEE/ACM Trans Comput Biol Bioinform. 2008 Apr-Jun;5(2):262-74. doi: 10.1109/TCBB.2007.1067. IEEE/ACM Trans Comput Biol Bioinform. 2008. PMID: 18451435

4

Recovering genetic regulatory networks from chromatin immunoprecipitation and steady-state microarray data.

Zhao W, Serpedin E, Dougherty ER. Zhao W, et al. Among authors: serpedin e. EURASIP J Bioinform Syst Biol. 2008;2008(1):248747. doi: 10.1155/2008/248747. EURASIP J Bioinform Syst Biol. 2008. PMID: 18584039 Free PMC article.

5

Detecting periodic genes from irregularly sampled gene expressions: a comparison study.

Zhao W, Agyepong K, Serpedin E, Dougherty ER. Zhao W, et al. Among authors: serpedin e. EURASIP J Bioinform Syst Biol. 2008;2008(1):769293. doi: 10.1155/2008/769293. EURASIP J Bioinform Syst Biol. 2008. PMID: 18584052 Free PMC article.

6

Spectral preprocessing for clustering time-series gene expressions.

Zhao W, Serpedin E, Dougherty ER. Zhao W, et al. Among authors: serpedin e. EURASIP J Bioinform Syst Biol. 2009;2009(1):713248. doi: 10.1155/2009/713248. Epub 2009 Apr 8. EURASIP J Bioinform Syst Biol. 2009. PMID: 19381338 Free PMC article.

7

Identifying genes involved in cyclic processes by combining gene expression analysis and prior knowledge.

Zhao W, Serpedin E, Dougherty ER. Zhao W, et al. Among authors: serpedin e. EURASIP J Bioinform Syst Biol. 2009;2009(1):683463. doi: 10.1155/2009/683463. Epub 2009 Apr 15. EURASIP J Bioinform Syst Biol. 2009. PMID: 19390635 Free PMC article.

8

Stochastic modeling of the relationship between copy number and gene expression based on transcriptional logic.

Hsu FH, Serpedin E, Chen Y, Dougherty ER. Hsu FH, et al. Among authors: serpedin e. IEEE Trans Biomed Eng. 2012 Jan;59(1):272-80. doi: 10.1109/TBME.2011.2173341. Epub 2011 Oct 24. IEEE Trans Biomed Eng. 2012. PMID: 22042124

9

Evaluating dynamic effects of copy number alterations on gene expression using a single transcription model.

Hsu FH, Serpedin E, Chen Y, Dougherty ER. Hsu FH, et al. Among authors: serpedin e. IEEE Trans Biomed Eng. 2012 Oct;59(10):2726-36. doi: 10.1109/TBME.2012.2208749. IEEE Trans Biomed Eng. 2012. PMID: 22996722

10

Spectral analysis on time-course expression data: detecting periodic genes using a real-valued iterative adaptive approach.

Agyepong KS, Hsu FH, Dougherty ER, Serpedin E. Agyepong KS, et al. Among authors: serpedin e. Adv Bioinformatics. 2013;2013:171530. doi: 10.1155/2013/171530. Epub 2013 Feb 28. Adv Bioinformatics. 2013. PMID: 23533399 Free PMC article.

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