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Genome sequence of the Corynebacterium pseudotuberculosis Cp316 strain, isolated from the abscess of a Californian horse.
Ramos RT, Silva A, Carneiro AR, Pinto AC, Soares Sde C, Santos AR, Almeida SS, Guimarães LC, Aburjaile FF, Barbosa EG, Dorella FA, Rocha FS, Cerdeira LT, Barbosa MS, Tauch A, Edman J, Spier S, Miyoshi A, Schneider MP, Azevedo V. Ramos RT, et al. Among authors: silva a. J Bacteriol. 2012 Dec;194(23):6620-1. doi: 10.1128/JB.01616-12. J Bacteriol. 2012. PMID: 23144380 Free PMC article.
Complete genome sequence of Corynebacterium pseudotuberculosis Cp31, isolated from an Egyptian buffalo.
Silva A, Ramos RT, Ribeiro Carneiro A, Cybelle Pinto A, de Castro Soares S, Rodrigues Santos A, Silva Almeida S, Guimarães LC, Figueira Aburjaile F, Vieira Barbosa EG, Alves Dorella F, Souza Rocha F, Souza Lopes T, Kawasaki R, Gomes Sá P, da Rocha Coimbra NA, Teixeira Cerdeira L, Silvanira Barbosa M, Cruz Schneider MP, Miyoshi A, Selim SA, Moawad MS, Azevedo V. Silva A, et al. Among authors: silva almeida s. J Bacteriol. 2012 Dec;194(23):6663-4. doi: 10.1128/JB.01782-12. J Bacteriol. 2012. PMID: 23144408 Free PMC article.
Genome sequence of Exiguobacterium antarcticum B7, isolated from a biofilm in Ginger Lake, King George Island, Antarctica.
Carneiro AR, Ramos RT, Dall'Agnol H, Pinto AC, de Castro Soares S, Santos AR, Guimarães LC, Almeida SS, Baraúna RA, das Graças DA, Franco LC, Ali A, Hassan SS, Nunes CI, Barbosa MS, Fiaux KK, Aburjaile FF, Barbosa EG, Bakhtiar SM, Vilela D, Nóbrega F, dos Santos AL, Carepo MS, Azevedo V, Schneider MP, Pellizari VH, Silva A. Carneiro AR, et al. Among authors: silva a. J Bacteriol. 2012 Dec;194(23):6689-90. doi: 10.1128/JB.01791-12. J Bacteriol. 2012. PMID: 23144424 Free PMC article.
Ion Torrent-based transcriptional assessment of a Corynebacterium pseudotuberculosis equi strain reveals denaturing high-performance liquid chromatography a promising rRNA depletion method.
Castro TL, Seyffert N, Ramos RT, Barbosa S, Carvalho RD, Pinto AC, Carneiro AR, Silva WM, Pacheco LG, Downson C, Schneider MP, Miyoshi A, Azevedo V, Silva A. Castro TL, et al. Among authors: silva a, silva wm. Microb Biotechnol. 2013 Mar;6(2):168-77. doi: 10.1111/1751-7915.12020. Epub 2013 Jan 15. Microb Biotechnol. 2013. PMID: 23316806 Free PMC article.
The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains.
Soares SC, Silva A, Trost E, Blom J, Ramos R, Carneiro A, Ali A, Santos AR, Pinto AC, Diniz C, Barbosa EG, Dorella FA, Aburjaile F, Rocha FS, Nascimento KK, Guimarães LC, Almeida S, Hassan SS, Bakhtiar SM, Pereira UP, Abreu VA, Schneider MP, Miyoshi A, Tauch A, Azevedo V. Soares SC, et al. Among authors: silva a. PLoS One. 2013;8(1):e53818. doi: 10.1371/journal.pone.0053818. Epub 2013 Jan 14. PLoS One. 2013. PMID: 23342011 Free PMC article.
High efficiency application of a mate-paired library from next-generation sequencing to postlight sequencing: Corynebacterium pseudotuberculosis as a case study for microbial de novo genome assembly.
Ramos RT, Carneiro AR, de Castro Soares S, Barbosa S, Varuzza L, Orabona G, Tauch A, Azevedo V, Schneider MP, Silva A. Ramos RT, et al. Among authors: silva a. J Microbiol Methods. 2013 Dec;95(3):441-7. doi: 10.1016/j.mimet.2013.06.006. Epub 2013 Jun 21. J Microbiol Methods. 2013. PMID: 23792707
Whole-genome optical mapping reveals a mis-assembly between two rRNA operons of Corynebacterium pseudotuberculosis strain 1002.
Mariano DC, Sousa Tde J, Pereira FL, Aburjaile F, Barh D, Rocha F, Pinto AC, Hassan SS, Saraiva TD, Dorella FA, de Carvalho AF, Leal CA, Figueiredo HC, Silva A, Ramos RT, Azevedo VA. Mariano DC, et al. Among authors: silva a. BMC Genomics. 2016 Apr 30;17:315. doi: 10.1186/s12864-016-2673-7. BMC Genomics. 2016. PMID: 27129708 Free PMC article.
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