Nikolsky Y - Search Results

1

Knowledge-based analysis of proteomics data.

Bessarabova M, Ishkin A, JeBailey L, Nikolskaya T, Nikolsky Y. Bessarabova M, et al. Among authors: nikolsky y. BMC Bioinformatics. 2012;13 Suppl 16(Suppl 16):S13. doi: 10.1186/1471-2105-13-S16-S13. Epub 2012 Nov 5. BMC Bioinformatics. 2012. PMID: 23176192 Free PMC article. Review.

2

Biological networks and analysis of experimental data in drug discovery.

Nikolsky Y, Nikolskaya T, Bugrim A. Nikolsky Y, et al. Drug Discov Today. 2005 May 1;10(9):653-62. doi: 10.1016/S1359-6446(05)03420-3. Drug Discov Today. 2005. PMID: 15894230 Review.

3

Functional analysis of OMICs data and small molecule compounds in an integrated "knowledge-based" platform.

Nikolsky Y, Kirillov E, Zuev R, Rakhmatulin E, Nikolskaya T. Nikolsky Y, et al. Methods Mol Biol. 2009;563:177-96. doi: 10.1007/978-1-60761-175-2_10. Methods Mol Biol. 2009. PMID: 19597786

4

Functional Analysis of OMICs Data and Small Molecule Compounds in an Integrated "Knowledge-Based" Platform.

Dubovenko A, Nikolsky Y, Rakhmatulin E, Nikolskaya T. Dubovenko A, et al. Among authors: nikolsky y. Methods Mol Biol. 2017;1613:101-124. doi: 10.1007/978-1-4939-7027-8_6. Methods Mol Biol. 2017. PMID: 28849560

5

Pathway mapping tools for analysis of high content data.

Ekins S, Nikolsky Y, Bugrim A, Kirillov E, Nikolskaya T. Ekins S, et al. Among authors: nikolsky y. Methods Mol Biol. 2007;356:319-50. doi: 10.1385/1-59745-217-3:319. Methods Mol Biol. 2007. PMID: 16988414 Review.

6

Functional synergies yet distinct modulators affected by genetic alterations in common human cancers.

Bessarabova M, Pustovalova O, Shi W, Serebriyskaya T, Ishkin A, Polyak K, Velculescu VE, Nikolskaya T, Nikolsky Y. Bessarabova M, et al. Among authors: nikolsky y. Cancer Res. 2011 May 15;71(10):3471-81. doi: 10.1158/0008-5472.CAN-10-3038. Epub 2011 Mar 11. Cancer Res. 2011. PMID: 21398405

7

Prediction of organ toxicity endpoints by QSAR modeling based on precise chemical-histopathology annotations.

Myshkin E, Brennan R, Khasanova T, Sitnik T, Serebriyskaya T, Litvinova E, Guryanov A, Nikolsky Y, Nikolskaya T, Bureeva S. Myshkin E, et al. Among authors: nikolsky y. Chem Biol Drug Des. 2012 Sep;80(3):406-16. doi: 10.1111/j.1747-0285.2012.01411.x. Epub 2012 Jun 27. Chem Biol Drug Des. 2012. PMID: 22583392

8

Drug target prediction and repositioning using an integrated network-based approach.

Emig D, Ivliev A, Pustovalova O, Lancashire L, Bureeva S, Nikolsky Y, Bessarabova M. Emig D, et al. Among authors: nikolsky y. PLoS One. 2013 Apr 4;8(4):e60618. doi: 10.1371/journal.pone.0060618. Print 2013. PLoS One. 2013. PMID: 23593264 Free PMC article.

9

Reconstitution of the ERG Gene Expression Network Reveals New Biomarkers and Therapeutic Targets in ERG Positive Prostate Tumors.

Dubovenko A, Serebryiskaya T, Nikolsky Y, Nikolskaya T, Perlina A, JeBailey L, Bureeva S, Katta S, Srivastava S, Dobi A, Khasanova T. Dubovenko A, et al. Among authors: nikolsky y. J Cancer. 2015 Apr 1;6(6):490-501. doi: 10.7150/jca.8213. eCollection 2015. J Cancer. 2015. PMID: 26000039 Free PMC article.

10

Identifying disease-specific genes based on their topological significance in protein networks.

Dezso Z, Nikolsky Y, Nikolskaya T, Miller J, Cherba D, Webb C, Bugrim A. Dezso Z, et al. Among authors: nikolsky y. BMC Syst Biol. 2009 Mar 23;3:36. doi: 10.1186/1752-0509-3-36. BMC Syst Biol. 2009. PMID: 19309513 Free PMC article.

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