Smith JC - Search Results

1

Coupled flexibility change in cytochrome P450cam substrate binding determined by neutron scattering, NMR, and molecular dynamics simulation.

Miao Y, Yi Z, Cantrell C, Glass DC, Baudry J, Jain N, Smith JC. Miao Y, et al. Among authors: smith jc. Biophys J. 2012 Nov 21;103(10):2167-76. doi: 10.1016/j.bpj.2012.10.013. Epub 2012 Nov 20. Biophys J. 2012. PMID: 23200050 Free PMC article.

2

Simulation analysis of the retinal conformational equilibrium in dark-adapted bacteriorhodopsin.

Baudry J, Crouzy S, Roux B, Smith JC. Baudry J, et al. Among authors: smith jc. Biophys J. 1999 Apr;76(4):1909-17. doi: 10.1016/S0006-3495(99)77349-2. Biophys J. 1999. PMID: 10096888 Free PMC article.

3

Temperature dependence of protein dynamics: computer simulation analysis of neutron scattering properties.

Hayward JA, Smith JC. Hayward JA, et al. Among authors: smith jc. Biophys J. 2002 Mar;82(3):1216-25. doi: 10.1016/S0006-3495(02)75478-7. Biophys J. 2002. PMID: 11867439 Free PMC article.

4

Molecular dynamics decomposition of temperature-dependent elastic neutron scattering by a protein solution.

Hayward JA, Finney JL, Daniel RM, Smith JC. Hayward JA, et al. Among authors: smith jc. Biophys J. 2003 Aug;85(2):679-85. doi: 10.1016/S0006-3495(03)74511-1. Biophys J. 2003. PMID: 12885619 Free PMC article.

5

Neutron frequency windows and the protein dynamical transition.

Becker T, Hayward JA, Finney JL, Daniel RM, Smith JC. Becker T, et al. Among authors: smith jc. Biophys J. 2004 Sep;87(3):1436-44. doi: 10.1529/biophysj.104.042226. Biophys J. 2004. PMID: 15345526 Free PMC article.

6

Fluctuations and correlations in crystalline protein dynamics: a simulation analysis of staphylococcal nuclease.

Meinhold L, Smith JC. Meinhold L, et al. Among authors: smith jc. Biophys J. 2005 Apr;88(4):2554-63. doi: 10.1529/biophysj.104.056101. Epub 2005 Jan 28. Biophys J. 2005. PMID: 15681654 Free PMC article.

7

Can proteins and crystals self-catalyze methyl rotations?

Baudry J, Smith JC. Baudry J, et al. Among authors: smith jc. J Phys Chem B. 2005 Nov 3;109(43):20572-8. doi: 10.1021/jp053111z. J Phys Chem B. 2005. PMID: 16853663

8

Coarse-grained biomolecular simulation with REACH: realistic extension algorithm via covariance Hessian.

Moritsugu K, Smith JC. Moritsugu K, et al. Among authors: smith jc. Biophys J. 2007 Nov 15;93(10):3460-9. doi: 10.1529/biophysj.107.111898. Epub 2007 Aug 10. Biophys J. 2007. PMID: 17693469 Free PMC article.

9

Protein dynamics and stability: the distribution of atomic fluctuations in thermophilic and mesophilic dihydrofolate reductase derived using elastic incoherent neutron scattering.

Meinhold L, Clement D, Tehei M, Daniel R, Finney JL, Smith JC. Meinhold L, et al. Among authors: smith jc. Biophys J. 2008 Jun;94(12):4812-8. doi: 10.1529/biophysj.107.121418. Epub 2008 Feb 29. Biophys J. 2008. PMID: 18310248 Free PMC article.

10

REACH coarse-grained biomolecular simulation: transferability between different protein structural classes.

Moritsugu K, Smith JC. Moritsugu K, et al. Among authors: smith jc. Biophys J. 2008 Aug;95(4):1639-48. doi: 10.1529/biophysj.108.131714. Epub 2008 May 9. Biophys J. 2008. PMID: 18469078 Free PMC article.

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