Marttinen P - Search Results

1

Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus.

Castillo-Ramírez S, Corander J, Marttinen P, Aldeljawi M, Hanage WP, Westh H, Boye K, Gulay Z, Bentley SD, Parkhill J, Holden MT, Feil EJ. Castillo-Ramírez S, et al. Among authors: marttinen p. Genome Biol. 2012 Dec 27;13(12):R126. doi: 10.1186/gb-2012-13-12-r126. Genome Biol. 2012. PMID: 23270620 Free PMC article.

2

Detection of recombination events in bacterial genomes from large population samples.

Marttinen P, Hanage WP, Croucher NJ, Connor TR, Harris SR, Bentley SD, Corander J. Marttinen P, et al. Nucleic Acids Res. 2012 Jan;40(1):e6. doi: 10.1093/nar/gkr928. Epub 2011 Nov 7. Nucleic Acids Res. 2012. PMID: 22064866 Free PMC article.

3

Speciation trajectories in recombining bacterial species.

Marttinen P, Hanage WP. Marttinen P, et al. PLoS Comput Biol. 2017 Jul 3;13(7):e1005640. doi: 10.1371/journal.pcbi.1005640. eCollection 2017 Jul. PLoS Comput Biol. 2017. PMID: 28671999 Free PMC article.

4

Bayesian modeling of recombination events in bacterial populations.

Marttinen P, Baldwin A, Hanage WP, Dowson C, Mahenthiralingam E, Corander J. Marttinen P, et al. BMC Bioinformatics. 2008 Oct 7;9:421. doi: 10.1186/1471-2105-9-421. BMC Bioinformatics. 2008. PMID: 18840286 Free PMC article.

5

Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations.

Mostowy R, Croucher NJ, Andam CP, Corander J, Hanage WP, Marttinen P. Mostowy R, et al. Among authors: marttinen p. Mol Biol Evol. 2017 May 1;34(5):1167-1182. doi: 10.1093/molbev/msx066. Mol Biol Evol. 2017. PMID: 28199698 Free PMC article.

6

Bayesian identification of admixture events using multilocus molecular markers.

Corander J, Marttinen P. Corander J, et al. Among authors: marttinen p. Mol Ecol. 2006 Sep;15(10):2833-43. doi: 10.1111/j.1365-294X.2006.02994.x. Mol Ecol. 2006. PMID: 16911204

7

Efficient Bayesian approach for multilocus association mapping including gene-gene interactions.

Marttinen P, Corander J. Marttinen P, et al. BMC Bioinformatics. 2010 Sep 2;11:443. doi: 10.1186/1471-2105-11-443. BMC Bioinformatics. 2010. PMID: 20809988 Free PMC article.

8

Reconstructing population histories from single nucleotide polymorphism data.

Sirén J, Marttinen P, Corander J. Sirén J, et al. Among authors: marttinen p. Mol Biol Evol. 2011 Jan;28(1):673-83. doi: 10.1093/molbev/msq236. Epub 2010 Sep 6. Mol Biol Evol. 2011. PMID: 20819907

9

Dense genomic sampling identifies highways of pneumococcal recombination.

Chewapreecha C, Harris SR, Croucher NJ, Turner C, Marttinen P, Cheng L, Pessia A, Aanensen DM, Mather AE, Page AJ, Salter SJ, Harris D, Nosten F, Goldblatt D, Corander J, Parkhill J, Turner P, Bentley SD. Chewapreecha C, et al. Among authors: marttinen p. Nat Genet. 2014 Mar;46(3):305-309. doi: 10.1038/ng.2895. Epub 2014 Feb 9. Nat Genet. 2014. PMID: 24509479 Free PMC article.

10

The impact of host metapopulation structure on the population genetics of colonizing bacteria.

Numminen E, Gutmann M, Shubin M, Marttinen P, Méric G, van Schaik W, Coque TM, Baquero F, Willems RJ, Sheppard SK, Feil EJ, Hanage WP, Corander J. Numminen E, et al. Among authors: marttinen p. J Theor Biol. 2016 May 7;396:53-62. doi: 10.1016/j.jtbi.2016.02.019. Epub 2016 Feb 23. J Theor Biol. 2016. PMID: 26916623 Free article.

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