Li L - Search Results

1

A dynamic time order network for time-series gene expression data analysis.

Zhang P, Mourad R, Xiang Y, Huang K, Huang T, Nephew K, Liu Y, Li L. Zhang P, et al. Among authors: li l. BMC Syst Biol. 2012;6 Suppl 3(Suppl 3):S9. doi: 10.1186/1752-0509-6-S3-S9. Epub 2012 Dec 17. BMC Syst Biol. 2012. PMID: 23281615 Free PMC article.

2

Epigenetic hypothesis tests for methylation and acetylation in a triple microarray system.

Li L, Shi H, Yiannoutsos C, Huang TH, Nephew KP. Li L, et al. J Comput Biol. 2005 Apr;12(3):370-90. doi: 10.1089/cmb.2005.12.370. J Comput Biol. 2005. PMID: 15857248

3

Prognostic DNA methylation biomarkers in ovarian cancer.

Wei SH, Balch C, Paik HH, Kim YS, Baldwin RL, Liyanarachchi S, Li L, Wang Z, Wan JC, Davuluri RV, Karlan BY, Gifford G, Brown R, Kim S, Huang TH, Nephew KP. Wei SH, et al. Among authors: li l. Clin Cancer Res. 2006 May 1;12(9):2788-94. doi: 10.1158/1078-0432.CCR-05-1551. Clin Cancer Res. 2006. PMID: 16675572

4

Endoxifen, a secondary metabolite of tamoxifen, and 4-OH-tamoxifen induce similar changes in global gene expression patterns in MCF-7 breast cancer cells.

Lim YC, Li L, Desta Z, Zhao Q, Rae JM, Flockhart DA, Skaar TC. Lim YC, et al. Among authors: li l. J Pharmacol Exp Ther. 2006 Aug;318(2):503-12. doi: 10.1124/jpet.105.100511. Epub 2006 May 11. J Pharmacol Exp Ther. 2006. PMID: 16690721

5

A mixture model-based discriminate analysis for identifying ordered transcription factor binding site pairs in gene promoters directly regulated by estrogen receptor-alpha.

Li L, Cheng AS, Jin VX, Paik HH, Fan M, Li X, Zhang W, Robarge J, Balch C, Davuluri RV, Kim S, Huang TH, Nephew KP. Li L, et al. Among authors: li x. Bioinformatics. 2006 Sep 15;22(18):2210-6. doi: 10.1093/bioinformatics/btl329. Epub 2006 Jun 29. Bioinformatics. 2006. PMID: 16809387

6

Diverse gene expression and DNA methylation profiles correlate with differential adaptation of breast cancer cells to the antiestrogens tamoxifen and fulvestrant.

Fan M, Yan PS, Hartman-Frey C, Chen L, Paik H, Oyer SL, Salisbury JD, Cheng AS, Li L, Abbosh PH, Huang TH, Nephew KP. Fan M, et al. Among authors: li l. Cancer Res. 2006 Dec 15;66(24):11954-66. doi: 10.1158/0008-5472.CAN-06-1666. Cancer Res. 2006. PMID: 17178894

7

Using RNase sequence specificity to refine the identification of RNA-protein binding regions.

Wang X, Wang G, Shen C, Li L, Wang X, Mooney SD, Edenberg HJ, Sanford JR, Liu Y. Wang X, et al. Among authors: li l. BMC Genomics. 2008;9 Suppl 1(Suppl 1):S17. doi: 10.1186/1471-2164-9-S1-S17. BMC Genomics. 2008. PMID: 18366606 Free PMC article.

8

Identification of transcription factor and microRNA binding sites in responsible to fetal alcohol syndrome.

Wang G, Wang X, Wang Y, Yang JY, Li L, Nephew KP, Edenberg HJ, Zhou FC, Liu Y. Wang G, et al. Among authors: li l. BMC Genomics. 2008;9 Suppl 1(Suppl 1):S19. doi: 10.1186/1471-2164-9-S1-S19. BMC Genomics. 2008. PMID: 18366608 Free PMC article.

9

Enriched transcription factor binding sites in hypermethylated gene promoters in drug resistant cancer cells.

Li M, Paik HI, Balch C, Kim Y, Li L, Huang TH, Nephew KP, Kim S. Li M, et al. Among authors: li l. Bioinformatics. 2008 Aug 15;24(16):1745-8. doi: 10.1093/bioinformatics/btn256. Epub 2008 Jun 6. Bioinformatics. 2008. PMID: 18540022 Free PMC article.

10

A Poisson mixture model to identify changes in RNA polymerase II binding quantity using high-throughput sequencing technology.

Feng W, Liu Y, Wu J, Nephew KP, Huang TH, Li L. Feng W, et al. Among authors: li l. BMC Genomics. 2008 Sep 16;9 Suppl 2(Suppl 2):S23. doi: 10.1186/1471-2164-9-S2-S23. BMC Genomics. 2008. PMID: 18831789 Free PMC article.

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