Gascuel O - Search Results

1

Chevenet F, Jung M, Peeters M, de Oliveira T, Gascuel O. Chevenet F, et al. Among authors: gascuel o. Bioinformatics. 2013 Mar 1;29(5):561-70. doi: 10.1093/bioinformatics/btt010. Epub 2013 Jan 17. Bioinformatics. 2013. PMID: 23329414 Free PMC article.

2

Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood.

Hordijk W, Gascuel O. Hordijk W, et al. Among authors: gascuel o. Bioinformatics. 2005 Dec 15;21(24):4338-47. doi: 10.1093/bioinformatics/bti713. Epub 2005 Oct 18. Bioinformatics. 2005. PMID: 16234323

3

Using repeated measurements to validate hierarchical gene clusters.

Bréhélin L, Gascuel O, Martin O. Bréhélin L, et al. Among authors: gascuel o. Bioinformatics. 2008 Mar 1;24(5):682-8. doi: 10.1093/bioinformatics/btn017. Epub 2008 Jan 19. Bioinformatics. 2008. PMID: 18204054

4

Fast NJ-like algorithms to deal with incomplete distance matrices.

Criscuolo A, Gascuel O. Criscuolo A, et al. Among authors: gascuel o. BMC Bioinformatics. 2008 Mar 26;9:166. doi: 10.1186/1471-2105-9-166. BMC Bioinformatics. 2008. PMID: 18366787 Free PMC article.

5

Phylogeny.fr: robust phylogenetic analysis for the non-specialist.

Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F, Dufayard JF, Guindon S, Lefort V, Lescot M, Claverie JM, Gascuel O. Dereeper A, et al. Among authors: gascuel o. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W465-9. doi: 10.1093/nar/gkn180. Epub 2008 Apr 19. Nucleic Acids Res. 2008. PMID: 18424797 Free PMC article.

6

Empirical profile mixture models for phylogenetic reconstruction.

Quang le S, Gascuel O, Lartillot N. Quang le S, et al. Among authors: gascuel o. Bioinformatics. 2008 Oct 15;24(20):2317-23. doi: 10.1093/bioinformatics/btn445. Epub 2008 Aug 21. Bioinformatics. 2008. PMID: 18718941

7

Detection of new protein domains using co-occurrence: application to Plasmodium falciparum.

Terrapon N, Gascuel O, Maréchal E, Bréehélin L. Terrapon N, et al. Among authors: gascuel o. Bioinformatics. 2009 Dec 1;25(23):3077-83. doi: 10.1093/bioinformatics/btp560. Epub 2009 Sep 28. Bioinformatics. 2009. PMID: 19786484

8

The origin and evolutionary history of HIV-1 subtype C in Senegal.

Jung M, Leye N, Vidal N, Fargette D, Diop H, Toure Kane C, Gascuel O, Peeters M. Jung M, et al. Among authors: gascuel o. PLoS One. 2012;7(3):e33579. doi: 10.1371/journal.pone.0033579. Epub 2012 Mar 28. PLoS One. 2012. PMID: 22470456 Free PMC article.

9

Sexually-transmitted/founder HIV-1 cannot be directly predicted from plasma or PBMC-derived viral quasispecies in the transmitting partner.

Frange P, Meyer L, Jung M, Goujard C, Zucman D, Abel S, Hochedez P, Gousset M, Gascuel O, Rouzioux C, Chaix ML; ANRS PRIMO Cohort Study Group. Frange P, et al. Among authors: gascuel o. PLoS One. 2013 Jul 9;8(7):e69144. doi: 10.1371/journal.pone.0069144. Print 2013. PLoS One. 2013. PMID: 23874894 Free PMC article.

10

A phylotype-based analysis highlights the role of drug-naive HIV-positive individuals in the transmission of antiretroviral resistance in the UK.

Mourad R, Chevennet F, Dunn DT, Fearnhill E, Delpech V, Asboe D, Gascuel O, Hue S; UK HIV Drug Resistance Database & the Collaborative HIV, Anti-HIV Drug Resistance Network. Mourad R, et al. Among authors: gascuel o. AIDS. 2015 Sep 24;29(15):1917-25. doi: 10.1097/QAD.0000000000000768. AIDS. 2015. PMID: 26355570

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