Swenson LC - Search Results

1

Development of a novel codon-specific polymerase chain reaction for the detection of CXCR4-utilizing HIV type 1 subtype B.

McLaughlin S, Swenson LC, Hu S, Hughes P, Harrigan PR, Coombs RW, Frenkel LM. McLaughlin S, et al. Among authors: swenson lc. AIDS Res Hum Retroviruses. 2013 May;29(5):814-25. doi: 10.1089/aid.2012.0024. Epub 2013 Mar 6. AIDS Res Hum Retroviruses. 2013. PMID: 23343425 Free PMC article.

2

HIV coreceptor phenotyping in the clinical setting.

Low AJ, Swenson LC, Harrigan PR. Low AJ, et al. Among authors: swenson lc. AIDS Rev. 2008 Jul-Sep;10(3):143-51. AIDS Rev. 2008. PMID: 18820716 Review.

3

Risk of breast cancer with CXCR4-using HIV defined by V3 loop sequencing.

Goedert JJ, Swenson LC, Napolitano LA, Haddad M, Anastos K, Minkoff H, Young M, Levine A, Adeyemi O, Seaberg EC, Aouizerat B, Rabkin CS, Harrigan PR, Hessol NA. Goedert JJ, et al. Among authors: swenson lc. J Acquir Immune Defic Syndr. 2015 Jan 1;68(1):30-5. doi: 10.1097/QAI.0000000000000400. J Acquir Immune Defic Syndr. 2015. PMID: 25321183 Free PMC article.

4

Improved detection of CXCR4-using HIV by V3 genotyping: application of population-based and "deep" sequencing to plasma RNA and proviral DNA.

Swenson LC, Moores A, Low AJ, Thielen A, Dong W, Woods C, Jensen MA, Wynhoven B, Chan D, Glascock C, Harrigan PR. Swenson LC, et al. J Acquir Immune Defic Syndr. 2010 Aug;54(5):506-10. doi: 10.1097/QAI.0b013e3181d0558f. J Acquir Immune Defic Syndr. 2010. PMID: 20512044

5

Genotypic inference of HIV-1 tropism using population-based sequencing of V3.

McGovern RA, Harrigan PR, Swenson LC. McGovern RA, et al. Among authors: swenson lc. J Vis Exp. 2010 Dec 27;(46):2531. doi: 10.3791/2531. J Vis Exp. 2010. PMID: 21248683 Free PMC article.

6

Detection of inferred CCR5- and CXCR4-using HIV-1 variants and evolutionary intermediates using ultra-deep pyrosequencing.

Bunnik EM, Swenson LC, Edo-Matas D, Huang W, Dong W, Frantzell A, Petropoulos CJ, Coakley E, Schuitemaker H, Harrigan PR, van 't Wout AB. Bunnik EM, et al. Among authors: swenson lc. PLoS Pathog. 2011 Jun;7(6):e1002106. doi: 10.1371/journal.ppat.1002106. Epub 2011 Jun 23. PLoS Pathog. 2011. PMID: 21731496 Free PMC article.

7

HIV drug resistance detected during low-level viraemia is associated with subsequent virologic failure.

Swenson LC, Min JE, Woods CK, Cai E, Li JZ, Montaner JS, Harrigan PR, Gonzalez-Serna A. Swenson LC, et al. AIDS. 2014 May 15;28(8):1125-34. doi: 10.1097/QAD.0000000000000203. AIDS. 2014. PMID: 24451160 Free PMC article.

8

Reconstructing the dynamics of HIV evolution within hosts from serial deep sequence data.

Poon AF, Swenson LC, Bunnik EM, Edo-Matas D, Schuitemaker H, van 't Wout AB, Harrigan PR. Poon AF, et al. Among authors: swenson lc. PLoS Comput Biol. 2012;8(11):e1002753. doi: 10.1371/journal.pcbi.1002753. Epub 2012 Nov 1. PLoS Comput Biol. 2012. PMID: 23133358 Free PMC article.

9

Deep sequencing to infer HIV-1 co-receptor usage: application to three clinical trials of maraviroc in treatment-experienced patients.

Swenson LC, Mo T, Dong WW, Zhong X, Woods CK, Jensen MA, Thielen A, Chapman D, Lewis M, James I, Heera J, Valdez H, Harrigan PR. Swenson LC, et al. J Infect Dis. 2011 Jan 15;203(2):237-45. doi: 10.1093/infdis/jiq030. J Infect Dis. 2011. PMID: 21288824 Free PMC article.

10

Mutations in gp41 are correlated with coreceptor tropism but do not improve prediction methods substantially.

Thielen A, Lengauer T, Swenson LC, Dong WW, McGovern RA, Lewis M, James I, Heera J, Valdez H, Harrigan PR. Thielen A, et al. Among authors: swenson lc. Antivir Ther. 2011;16(3):319-28. doi: 10.3851/IMP1769. Antivir Ther. 2011. PMID: 21555814

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