Yang L - Search Results

1

Metabolic model refinement using phenotypic microarray data.

Gawand P, Yang L, Cluett WR, Mahadevan R. Gawand P, et al. Among authors: yang l. Methods Mol Biol. 2013;985:47-59. doi: 10.1007/978-1-62703-299-5_3. Methods Mol Biol. 2013. PMID: 23417798

2

Thermodynamic analysis of regulation in metabolic networks using constraint-based modeling.

Garg S, Yang L, Mahadevan R. Garg S, et al. Among authors: yang l. BMC Res Notes. 2010 May 5;3:125. doi: 10.1186/1756-0500-3-125. BMC Res Notes. 2010. PMID: 20444261 Free PMC article.

3

EMILiO: a fast algorithm for genome-scale strain design.

Yang L, Cluett WR, Mahadevan R. Yang L, et al. Metab Eng. 2011 May;13(3):272-81. doi: 10.1016/j.ymben.2011.03.002. Epub 2011 Mar 21. Metab Eng. 2011. PMID: 21414417

4

Dynamic strain scanning optimization: an efficient strain design strategy for balanced yield, titer, and productivity. DySScO strategy for strain design.

Zhuang K, Yang L, Cluett WR, Mahadevan R. Zhuang K, et al. Among authors: yang l. BMC Biotechnol. 2013 Feb 6;13:8. doi: 10.1186/1472-6750-13-8. BMC Biotechnol. 2013. PMID: 23388063 Free PMC article.

5

Characterizing metabolic pathway diversification in the context of perturbation size.

Yang L, Srinivasan S, Mahadevan R, Cluett WR. Yang L, et al. Metab Eng. 2015 Mar;28:114-122. doi: 10.1016/j.ymben.2014.11.013. Epub 2014 Dec 24. Metab Eng. 2015. PMID: 25542850

6

Genome-scale model of Pseudomonas aeruginosa metabolism unveils virulence and drug potentiation.

Dahal S, Renz A, Dräger A, Yang L. Dahal S, et al. Among authors: yang l. Commun Biol. 2023 Feb 10;6(1):165. doi: 10.1038/s42003-023-04540-8. Commun Biol. 2023. PMID: 36765199 Free PMC article.

7

Novel context-specific genome-scale modelling explores the potential of triacylglycerol production by Chlamydomonas reinhardtii.

Yao H, Dahal S, Yang L. Yao H, et al. Among authors: yang l. Microb Cell Fact. 2023 Jan 17;22(1):13. doi: 10.1186/s12934-022-02004-y. Microb Cell Fact. 2023. PMID: 36650525 Free PMC article.

8

A dynamic metabolic map for diabetes.

Zhao J, Xu H, Yang L. Zhao J, et al. Among authors: yang l. Nat Comput Sci. 2021 May;1(5):309-310. doi: 10.1038/s43588-021-00075-2. Nat Comput Sci. 2021. PMID: 38217215 No abstract available.

9

StressME: Unified computing framework of Escherichia coli metabolism, gene expression, and stress responses.

Zhao J, Chen K, Palsson BO, Yang L. Zhao J, et al. Among authors: yang l. PLoS Comput Biol. 2024 Feb 12;20(2):e1011865. doi: 10.1371/journal.pcbi.1011865. eCollection 2024 Feb. PLoS Comput Biol. 2024. PMID: 38346086 Free PMC article.

10

Investigating the decomposition mechanism of DNAN/DNB cocrystal explosive under high temperature using ReaxFF/lg molecular dynamics simulations.

Li XY, Wang BG, Chen YF, Mao JS, Du JH, Yang L. Li XY, et al. Among authors: yang l. J Mol Model. 2025 Jan 18;31(2):51. doi: 10.1007/s00894-025-06281-3. J Mol Model. 2025. PMID: 39826013

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