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Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing.
Crosetto N, Mitra A, Silva MJ, Bienko M, Dojer N, Wang Q, Karaca E, Chiarle R, Skrzypczak M, Ginalski K, Pasero P, Rowicka M, Dikic I. Crosetto N, et al. Among authors: ginalski k. Nat Methods. 2013 Apr;10(4):361-5. doi: 10.1038/nmeth.2408. Epub 2013 Mar 17. Nat Methods. 2013. PMID: 23503052 Free PMC article.
Genome-wide mapping of long-range contacts unveils clustering of DNA double-strand breaks at damaged active genes.
Aymard F, Aguirrebengoa M, Guillou E, Javierre BM, Bugler B, Arnould C, Rocher V, Iacovoni JS, Biernacka A, Skrzypczak M, Ginalski K, Rowicka M, Fraser P, Legube G. Aymard F, et al. Among authors: ginalski k. Nat Struct Mol Biol. 2017 Apr;24(4):353-361. doi: 10.1038/nsmb.3387. Epub 2017 Mar 6. Nat Struct Mol Biol. 2017. PMID: 28263325 Free PMC article.
Ssb1 and Ssb2 cooperate to regulate mouse hematopoietic stem and progenitor cells by resolving replicative stress.
Shi W, Vu T, Boucher D, Biernacka A, Nde J, Pandita RK, Straube J, Boyle GM, Al-Ejeh F, Nag P, Jeffery J, Harris JL, Bain AL, Grzelak M, Skrzypczak M, Mitra A, Dojer N, Crosetto N, Cloonan N, Becherel OJ, Finnie J, Skaar JR, Walkley CR, Pandita TK, Rowicka M, Ginalski K, Lane SW, Khanna KK. Shi W, et al. Among authors: ginalski k. Blood. 2017 May 4;129(18):2479-2492. doi: 10.1182/blood-2016-06-725093. Epub 2017 Mar 7. Blood. 2017. PMID: 28270450 Free PMC article.
Predicting proteome dynamics using gene expression data.
Kuchta K, Towpik J, Biernacka A, Kutner J, Kudlicki A, Ginalski K, Rowicka M. Kuchta K, et al. Among authors: ginalski k. Sci Rep. 2018 Sep 14;8(1):13866. doi: 10.1038/s41598-018-31752-4. Sci Rep. 2018. PMID: 30217992 Free PMC article.
Comprehensive Mapping of Histone Modifications at DNA Double-Strand Breaks Deciphers Repair Pathway Chromatin Signatures.
Clouaire T, Rocher V, Lashgari A, Arnould C, Aguirrebengoa M, Biernacka A, Skrzypczak M, Aymard F, Fongang B, Dojer N, Iacovoni JS, Rowicka M, Ginalski K, Côté J, Legube G. Clouaire T, et al. Among authors: ginalski k. Mol Cell. 2018 Oct 18;72(2):250-262.e6. doi: 10.1016/j.molcel.2018.08.020. Epub 2018 Sep 27. Mol Cell. 2018. PMID: 30270107 Free PMC article.
i-BLESS is an ultra-sensitive method for detection of DNA double-strand breaks.
Biernacka A, Zhu Y, Skrzypczak M, Forey R, Pardo B, Grzelak M, Nde J, Mitra A, Kudlicki A, Crosetto N, Pasero P, Rowicka M, Ginalski K. Biernacka A, et al. Among authors: ginalski k. Commun Biol. 2018 Oct 31;1:181. doi: 10.1038/s42003-018-0165-9. eCollection 2018. Commun Biol. 2018. PMID: 30393778 Free PMC article.
113 results