Socha A - Search Results

1

Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules.

Roy S, Wapinski I, Pfiffner J, French C, Socha A, Konieczka J, Habib N, Kellis M, Thompson D, Regev A. Roy S, et al. Among authors: socha a. Genome Res. 2013 Jun;23(6):1039-50. doi: 10.1101/gr.146233.112. Epub 2013 May 2. Genome Res. 2013. PMID: 23640720 Free PMC article.

2

Evolutionary principles of modular gene regulation in yeasts.

Thompson DA, Roy S, Chan M, Styczynsky MP, Pfiffner J, French C, Socha A, Thielke A, Napolitano S, Muller P, Kellis M, Konieczka JH, Wapinski I, Regev A. Thompson DA, et al. Among authors: socha a. Elife. 2013 Jun 18;2:e00603. doi: 10.7554/eLife.00603. Elife. 2013. PMID: 23795289 Free PMC article.

3

Inference and Evolutionary Analysis of Genome-Scale Regulatory Networks in Large Phylogenies.

Koch C, Konieczka J, Delorey T, Lyons A, Socha A, Davis K, Knaack SA, Thompson D, O'Shea EK, Regev A, Roy S. Koch C, et al. Among authors: socha a. Cell Syst. 2017 May 24;4(5):543-558.e8. doi: 10.1016/j.cels.2017.04.010. Cell Syst. 2017. PMID: 28544882 Free PMC article.

4

Gene duplication and the evolution of ribosomal protein gene regulation in yeast.

Wapinski I, Pfiffner J, French C, Socha A, Thompson DA, Regev A. Wapinski I, et al. Among authors: socha a. Proc Natl Acad Sci U S A. 2010 Mar 23;107(12):5505-10. doi: 10.1073/pnas.0911905107. Epub 2010 Mar 8. Proc Natl Acad Sci U S A. 2010. PMID: 20212107 Free PMC article.

5

The role of nucleosome positioning in the evolution of gene regulation.

Tsankov AM, Thompson DA, Socha A, Regev A, Rando OJ. Tsankov AM, et al. Among authors: socha a. PLoS Biol. 2010 Jul 6;8(7):e1000414. doi: 10.1371/journal.pbio.1000414. PLoS Biol. 2010. PMID: 20625544 Free PMC article.

6

Correction: Evolutionary principles of modular gene regulation in yeasts.

Thompson DA, Roy S, Chan M, Styczynski MP, Pfiffner J, French C, Socha A, Thielke A, Napolitano S, Muller P, Kellis M, Konieczka JH, Wapinski I, Regev A. Thompson DA, et al. Among authors: socha a. Elife. 2013 Jul 2;2:e01114. doi: 10.7554/eLife.01114. Elife. 2013. PMID: 23840936 Free PMC article.

7

Determinants of divergent adaptation and Dobzhansky-Muller interaction in experimental yeast populations.

Anderson JB, Funt J, Thompson DA, Prabhu S, Socha A, Sirjusingh C, Dettman JR, Parreiras L, Guttman DS, Regev A, Kohn LM. Anderson JB, et al. Among authors: socha a. Curr Biol. 2010 Aug 10;20(15):1383-8. doi: 10.1016/j.cub.2010.06.022. Epub 2010 Jul 15. Curr Biol. 2010. PMID: 20637622 Free PMC article.

8

An erythropoietin autocrine/paracrine axis modulates the growth and survival of human prostate cancer cells.

Jeong JY, Hoxhaj G, Socha AL, Sytkowski AJ, Feldman L. Jeong JY, et al. Mol Cancer Res. 2009 Jul;7(7):1150-7. doi: 10.1158/1541-7786.MCR-08-0243. Epub 2009 Jun 30. Mol Cancer Res. 2009. PMID: 19567780

9

The Arabidopsis MTP8 transporter determines the localization of manganese and iron in seeds.

Chu HH, Car S, Socha AL, Hindt MN, Punshon T, Guerinot ML. Chu HH, et al. Sci Rep. 2017 Sep 8;7(1):11024. doi: 10.1038/s41598-017-11250-9. Sci Rep. 2017. PMID: 28887568 Free PMC article.

10

Mn-euvering manganese: the role of transporter gene family members in manganese uptake and mobilization in plants.

Socha AL, Guerinot ML. Socha AL, et al. Front Plant Sci. 2014 Apr 1;5:106. doi: 10.3389/fpls.2014.00106. eCollection 2014. Front Plant Sci. 2014. PMID: 24744764 Free PMC article. Review.

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