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A simple and reproducible breast cancer prognostic test.
Marchionni L, Afsari B, Geman D, Leek JT. Marchionni L, et al. Among authors: geman d. BMC Genomics. 2013 May 17;14:336. doi: 10.1186/1471-2164-14-336. BMC Genomics. 2013. PMID: 23682826 Free PMC article.
Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer.
Afsari B, Guo T, Considine M, Florea L, Kagohara LT, Stein-O'Brien GL, Kelley D, Flam E, Zambo KD, Ha PK, Geman D, Ochs MF, Califano JA, Gaykalova DA, Favorov AV, Fertig EJ. Afsari B, et al. Among authors: geman d. Bioinformatics. 2018 Jun 1;34(11):1859-1867. doi: 10.1093/bioinformatics/bty004. Bioinformatics. 2018. PMID: 29342249 Free PMC article.
An R package for divergence analysis of omics data.
Dinalankara W, Ke Q, Geman D, Marchionni L. Dinalankara W, et al. Among authors: geman d. PLoS One. 2021 Apr 5;16(4):e0249002. doi: 10.1371/journal.pone.0249002. eCollection 2021. PLoS One. 2021. PMID: 33819273 Free PMC article.
Digitizing omics profiles by divergence from a baseline.
Dinalankara W, Ke Q, Xu Y, Ji L, Pagane N, Lien A, Matam T, Fertig EJ, Price ND, Younes L, Marchionni L, Geman D. Dinalankara W, et al. Among authors: geman d. Proc Natl Acad Sci U S A. 2018 May 1;115(18):4545-4552. doi: 10.1073/pnas.1721628115. Epub 2018 Apr 16. Proc Natl Acad Sci U S A. 2018. PMID: 29666255 Free PMC article.
Identifying Personalized Metabolic Signatures in Breast Cancer.
Baloni P, Dinalankara W, Earls JC, Knijnenburg TA, Geman D, Marchionni L, Price ND. Baloni P, et al. Among authors: geman d. Metabolites. 2020 Dec 30;11(1):20. doi: 10.3390/metabo11010020. Metabolites. 2020. PMID: 33396819 Free PMC article.
46 results