Pan Y - Search Results

1

Identification of essential proteins from weighted protein-protein interaction networks.

Li M, Wang JX, Wang H, Pan Y. Li M, et al. Among authors: pan y. J Bioinform Comput Biol. 2013 Jun;11(3):1341002. doi: 10.1142/S0219720013410023. Epub 2013 Feb 25. J Bioinform Comput Biol. 2013. PMID: 23796179

2

A fast hierarchical clustering algorithm for functional modules discovery in protein interaction networks.

Wang J, Li M, Chen J, Pan Y. Wang J, et al. Among authors: pan y. IEEE/ACM Trans Comput Biol Bioinform. 2011 May-Jun;8(3):607-20. doi: 10.1109/TCBB.2010.75. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 20733244

3

Identifying protein complexes from interaction networks based on clique percolation and distance restriction.

Wang J, Liu B, Li M, Pan Y. Wang J, et al. Among authors: pan y. BMC Genomics. 2010 Nov 2;11 Suppl 2(Suppl 2):S10. doi: 10.1186/1471-2164-11-S2-S10. BMC Genomics. 2010. PMID: 21047377 Free PMC article.

4

Recent advances in clustering methods for protein interaction networks.

Wang J, Li M, Deng Y, Pan Y. Wang J, et al. Among authors: pan y. BMC Genomics. 2010 Dec 1;11 Suppl 3(Suppl 3):S10. doi: 10.1186/1471-2164-11-S3-S10. BMC Genomics. 2010. PMID: 21143777 Free PMC article.

5

A local average connectivity-based method for identifying essential proteins from the network level.

Li M, Wang J, Chen X, Wang H, Pan Y. Li M, et al. Among authors: pan y. Comput Biol Chem. 2011 Jun;35(3):143-50. doi: 10.1016/j.compbiolchem.2011.04.002. Epub 2011 Apr 30. Comput Biol Chem. 2011. PMID: 21704260

6

A comparison of the functional modules identified from time course and static PPI network data.

Tang X, Wang J, Liu B, Li M, Chen G, Pan Y. Tang X, et al. Among authors: pan y. BMC Bioinformatics. 2011 Aug 15;12:339. doi: 10.1186/1471-2105-12-339. BMC Bioinformatics. 2011. PMID: 21849017 Free PMC article.

7

Identification of essential proteins based on edge clustering coefficient.

Wang J, Li M, Wang H, Pan Y. Wang J, et al. Among authors: pan y. IEEE/ACM Trans Comput Biol Bioinform. 2012 Jul-Aug;9(4):1070-80. doi: 10.1109/TCBB.2011.147. IEEE/ACM Trans Comput Biol Bioinform. 2012. PMID: 22084147

8

A new essential protein discovery method based on the integration of protein-protein interaction and gene expression data.

Li M, Zhang H, Wang JX, Pan Y. Li M, et al. Among authors: pan y. BMC Syst Biol. 2012 Mar 10;6:15. doi: 10.1186/1752-0509-6-15. BMC Syst Biol. 2012. PMID: 22405054 Free PMC article.

9

Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.

Li M, Wu X, Wang J, Pan Y. Li M, et al. Among authors: pan y. BMC Bioinformatics. 2012 May 23;13:109. doi: 10.1186/1471-2105-13-109. BMC Bioinformatics. 2012. PMID: 22621308 Free PMC article.

10

Identifying protein complexes from interactome based on essential proteins and local fitness method.

Wang J, Chen G, Liu B, Li M, Pan Y. Wang J, et al. Among authors: pan y. IEEE Trans Nanobioscience. 2012 Dec;11(4):324-35. doi: 10.1109/TNB.2012.2197863. Epub 2012 Jun 12. IEEE Trans Nanobioscience. 2012. PMID: 22711784

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