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Page 1
COLOMBOS v2.0: an ever expanding collection of bacterial expression compendia.
Meysman P, Sonego P, Bianco L, Fu Q, Ledezma-Tejeida D, Gama-Castro S, Liebens V, Michiels J, Laukens K, Marchal K, Collado-Vides J, Engelen K. Meysman P, et al. Among authors: ledezma tejeida d. Nucleic Acids Res. 2014 Jan;42(Database issue):D649-53. doi: 10.1093/nar/gkt1086. Epub 2013 Nov 8. Nucleic Acids Res. 2014. PMID: 24214998 Free PMC article.
RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond.
Gama-Castro S, Salgado H, Santos-Zavaleta A, Ledezma-Tejeida D, Muñiz-Rascado L, García-Sotelo JS, Alquicira-Hernández K, Martínez-Flores I, Pannier L, Castro-Mondragón JA, Medina-Rivera A, Solano-Lira H, Bonavides-Martínez C, Pérez-Rueda E, Alquicira-Hernández S, Porrón-Sotelo L, López-Fuentes A, Hernández-Koutoucheva A, Del Moral-Chávez V, Rinaldi F, Collado-Vides J. Gama-Castro S, et al. Among authors: ledezma tejeida d. Nucleic Acids Res. 2016 Jan 4;44(D1):D133-43. doi: 10.1093/nar/gkv1156. Epub 2015 Nov 2. Nucleic Acids Res. 2016. PMID: 26527724 Free PMC article.
COLOMBOS v3.0: leveraging gene expression compendia for cross-species analyses.
Moretto M, Sonego P, Dierckxsens N, Brilli M, Bianco L, Ledezma-Tejeida D, Gama-Castro S, Galardini M, Romualdi C, Laukens K, Collado-Vides J, Meysman P, Engelen K. Moretto M, et al. Among authors: ledezma tejeida d. Nucleic Acids Res. 2016 Jan 4;44(D1):D620-3. doi: 10.1093/nar/gkv1251. Epub 2015 Nov 19. Nucleic Acids Res. 2016. PMID: 26586805 Free PMC article.
RegulonDB v 10.5: tackling challenges to unify classic and high throughput knowledge of gene regulation in E. coli K-12.
Santos-Zavaleta A, Salgado H, Gama-Castro S, Sánchez-Pérez M, Gómez-Romero L, Ledezma-Tejeida D, García-Sotelo JS, Alquicira-Hernández K, Muñiz-Rascado LJ, Peña-Loredo P, Ishida-Gutiérrez C, Velázquez-Ramírez DA, Del Moral-Chávez V, Bonavides-Martínez C, Méndez-Cruz CF, Galagan J, Collado-Vides J. Santos-Zavaleta A, et al. Among authors: ledezma tejeida d. Nucleic Acids Res. 2019 Jan 8;47(D1):D212-D220. doi: 10.1093/nar/gky1077. Nucleic Acids Res. 2019. PMID: 30395280 Free PMC article.
Sensory Systems and Transcriptional Regulation in Escherichia coli.
Femerling G, Gama-Castro S, Lara P, Ledezma-Tejeida D, Tierrafría VH, Muñiz-Rascado L, Bonavides-Martínez C, Collado-Vides J. Femerling G, et al. Among authors: ledezma tejeida d. Front Bioeng Biotechnol. 2022 Feb 14;10:823240. doi: 10.3389/fbioe.2022.823240. eCollection 2022. Front Bioeng Biotechnol. 2022. PMID: 35237580 Free PMC article. Review.
RegulonDB v12.0: a comprehensive resource of transcriptional regulation in E. coli K-12.
Salgado H, Gama-Castro S, Lara P, Mejia-Almonte C, Alarcón-Carranza G, López-Almazo AG, Betancourt-Figueroa F, Peña-Loredo P, Alquicira-Hernández S, Ledezma-Tejeida D, Arizmendi-Zagal L, Mendez-Hernandez F, Diaz-Gomez AK, Ochoa-Praxedis E, Muñiz-Rascado LJ, García-Sotelo JS, Flores-Gallegos FA, Gómez L, Bonavides-Martínez C, Del Moral-Chávez VM, Hernández-Alvarez AJ, Santos-Zavaleta A, Capella-Gutierrez S, Gelpi JL, Collado-Vides J. Salgado H, et al. Among authors: ledezma tejeida d. Nucleic Acids Res. 2024 Jan 5;52(D1):D255-D264. doi: 10.1093/nar/gkad1072. Nucleic Acids Res. 2024. PMID: 37971353 Free PMC article.