Baker D - Search Results

1

Computational design of a pH-sensitive IgG binding protein.

Strauch EM, Fleishman SJ, Baker D. Strauch EM, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2014 Jan 14;111(2):675-80. doi: 10.1073/pnas.1313605111. Epub 2013 Dec 31. Proc Natl Acad Sci U S A. 2014. PMID: 24381156 Free PMC article.

2

Protein folding kinetics exhibit an Arrhenius temperature dependence when corrected for the temperature dependence of protein stability.

Scalley ML, Baker D. Scalley ML, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 1997 Sep 30;94(20):10636-40. doi: 10.1073/pnas.94.20.10636. Proc Natl Acad Sci U S A. 1997. PMID: 9380687 Free PMC article.

3

The sequences of small proteins are not extensively optimized for rapid folding by natural selection.

Kim DE, Gu H, Baker D. Kim DE, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):4982-6. doi: 10.1073/pnas.95.9.4982. Proc Natl Acad Sci U S A. 1998. PMID: 9560214 Free PMC article.

4

Clustering of low-energy conformations near the native structures of small proteins.

Shortle D, Simons KT, Baker D. Shortle D, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 1998 Sep 15;95(19):11158-62. doi: 10.1073/pnas.95.19.11158. Proc Natl Acad Sci U S A. 1998. PMID: 9736706 Free PMC article.

5

Limited internal friction in the rate-limiting step of a two-state protein folding reaction.

Plaxco KW, Baker D. Plaxco KW, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 1998 Nov 10;95(23):13591-6. doi: 10.1073/pnas.95.23.13591. Proc Natl Acad Sci U S A. 1998. PMID: 9811844 Free PMC article.

6

Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures.

Alm E, Baker D. Alm E, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 1999 Sep 28;96(20):11305-10. doi: 10.1073/pnas.96.20.11305. Proc Natl Acad Sci U S A. 1999. PMID: 10500172 Free PMC article.

7

Long-range order in the src SH3 folding transition state.

Grantcharova VP, Riddle DS, Baker D. Grantcharova VP, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2000 Jun 20;97(13):7084-9. doi: 10.1073/pnas.97.13.7084. Proc Natl Acad Sci U S A. 2000. PMID: 10860975 Free PMC article.

8

Native protein sequences are close to optimal for their structures.

Kuhlman B, Baker D. Kuhlman B, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2000 Sep 12;97(19):10383-8. doi: 10.1073/pnas.97.19.10383. Proc Natl Acad Sci U S A. 2000. PMID: 10984534 Free PMC article.

9

Conversion of monomeric protein L to an obligate dimer by computational protein design.

Kuhlman B, O'Neill JW, Kim DE, Zhang KY, Baker D. Kuhlman B, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10687-91. doi: 10.1073/pnas.181354398. Epub 2001 Aug 28. Proc Natl Acad Sci U S A. 2001. PMID: 11526208 Free PMC article.

10

A simple physical model for binding energy hot spots in protein-protein complexes.

Kortemme T, Baker D. Kortemme T, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2002 Oct 29;99(22):14116-21. doi: 10.1073/pnas.202485799. Epub 2002 Oct 15. Proc Natl Acad Sci U S A. 2002. PMID: 12381794 Free PMC article.

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