Backofen R - Search Results

1

A complex of Cas proteins 5, 6, and 7 is required for the biogenesis and stability of clustered regularly interspaced short palindromic repeats (crispr)-derived rnas (crrnas) in Haloferax volcanii.

Brendel J, Stoll B, Lange SJ, Sharma K, Lenz C, Stachler AE, Maier LK, Richter H, Nickel L, Schmitz RA, Randau L, Allers T, Urlaub H, Backofen R, Marchfelder A. Brendel J, et al. Among authors: backofen r. J Biol Chem. 2014 Mar 7;289(10):7164-7177. doi: 10.1074/jbc.M113.508184. Epub 2014 Jan 23. J Biol Chem. 2014. PMID: 24459147 Free PMC article.

2

Global or local? Predicting secondary structure and accessibility in mRNAs.

Lange SJ, Maticzka D, Möhl M, Gagnon JN, Brown CM, Backofen R. Lange SJ, et al. Among authors: backofen r. Nucleic Acids Res. 2012 Jul;40(12):5215-26. doi: 10.1093/nar/gks181. Epub 2012 Feb 28. Nucleic Acids Res. 2012. PMID: 22373926 Free PMC article.

3

Characterization of CRISPR RNA processing in Clostridium thermocellum and Methanococcus maripaludis.

Richter H, Zoephel J, Schermuly J, Maticzka D, Backofen R, Randau L. Richter H, et al. Among authors: backofen r. Nucleic Acids Res. 2012 Oct;40(19):9887-96. doi: 10.1093/nar/gks737. Epub 2012 Aug 8. Nucleic Acids Res. 2012. PMID: 22879377 Free PMC article.

4

An archaeal sRNA targeting cis- and trans-encoded mRNAs via two distinct domains.

Jäger D, Pernitzsch SR, Richter AS, Backofen R, Sharma CM, Schmitz RA. Jäger D, et al. Among authors: backofen r. Nucleic Acids Res. 2012 Nov;40(21):10964-79. doi: 10.1093/nar/gks847. Epub 2012 Sep 10. Nucleic Acids Res. 2012. PMID: 22965121 Free PMC article.

5

Regulatory RNAs in archaea: first target identification in Methanoarchaea.

Prasse D, Ehlers C, Backofen R, Schmitz RA. Prasse D, et al. Among authors: backofen r. Biochem Soc Trans. 2013 Feb 1;41(1):344-9. doi: 10.1042/BST20120280. Biochem Soc Trans. 2013. PMID: 23356309

6

Comparative analysis ofCas6b processing and CRISPR RNA stability.

Richter H, Lange SJ, Backofen R, Randau L. Richter H, et al. Among authors: backofen r. RNA Biol. 2013 May;10(5):700-7. doi: 10.4161/rna.23715. RNA Biol. 2013. PMID: 23392318 Free PMC article.

7

CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving at least two Cas6 and a Cmr2 protein.

Scholz I, Lange SJ, Hein S, Hess WR, Backofen R. Scholz I, et al. Among authors: backofen r. PLoS One. 2013;8(2):e56470. doi: 10.1371/journal.pone.0056470. Epub 2013 Feb 18. PLoS One. 2013. PMID: 23441196 Free PMC article.

8

Essential requirements for the detection and degradation of invaders by the Haloferax volcanii CRISPR/Cas system I-B.

Maier LK, Lange SJ, Stoll B, Haas KA, Fischer S, Fischer E, Duchardt-Ferner E, Wöhnert J, Backofen R, Marchfelder A. Maier LK, et al. Among authors: backofen r. RNA Biol. 2013 May;10(5):865-74. doi: 10.4161/rna.24282. Epub 2013 Apr 17. RNA Biol. 2013. PMID: 23594992 Free PMC article.

9

Two CRISPR-Cas systems in Methanosarcina mazei strain Gö1 display common processing features despite belonging to different types I and III.

Nickel L, Weidenbach K, Jäger D, Backofen R, Lange SJ, Heidrich N, Schmitz RA. Nickel L, et al. Among authors: backofen r. RNA Biol. 2013 May;10(5):779-91. doi: 10.4161/rna.23928. Epub 2013 Apr 25. RNA Biol. 2013. PMID: 23619576 Free PMC article.

10

CRISPRmap: an automated classification of repeat conservation in prokaryotic adaptive immune systems.

Lange SJ, Alkhnbashi OS, Rose D, Will S, Backofen R. Lange SJ, et al. Among authors: backofen r. Nucleic Acids Res. 2013 Sep;41(17):8034-44. doi: 10.1093/nar/gkt606. Epub 2013 Jul 17. Nucleic Acids Res. 2013. PMID: 23863837 Free PMC article.

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