Bailey DJ - Search Results

1

Intelligent data acquisition blends targeted and discovery methods.

Bailey DJ, McDevitt MT, Westphall MS, Pagliarini DJ, Coon JJ. Bailey DJ, et al. J Proteome Res. 2014 Apr 4;13(4):2152-61. doi: 10.1021/pr401278j. Epub 2014 Mar 18. J Proteome Res. 2014. PMID: 24611583 Free PMC article.

2

Parallel reaction monitoring for high resolution and high mass accuracy quantitative, targeted proteomics.

Peterson AC, Russell JD, Bailey DJ, Westphall MS, Coon JJ. Peterson AC, et al. Among authors: bailey dj. Mol Cell Proteomics. 2012 Nov;11(11):1475-88. doi: 10.1074/mcp.O112.020131. Epub 2012 Aug 3. Mol Cell Proteomics. 2012. PMID: 22865924 Free PMC article.

3

Neutron-encoded mass signatures for quantitative top-down proteomics.

Rhoads TW, Rose CM, Bailey DJ, Riley NM, Molden RC, Nestler AJ, Merrill AE, Smith LM, Hebert AS, Westphall MS, Pagliarini DJ, Garcia BA, Coon JJ. Rhoads TW, et al. Among authors: bailey dj. Anal Chem. 2014 Mar 4;86(5):2314-9. doi: 10.1021/ac403579s. Epub 2014 Feb 19. Anal Chem. 2014. PMID: 24475910 Free PMC article.

4

Instant spectral assignment for advanced decision tree-driven mass spectrometry.

Bailey DJ, Rose CM, McAlister GC, Brumbaugh J, Yu P, Wenger CD, Westphall MS, Thomson JA, Coon JJ. Bailey DJ, et al. Proc Natl Acad Sci U S A. 2012 May 29;109(22):8411-6. doi: 10.1073/pnas.1205292109. Epub 2012 May 14. Proc Natl Acad Sci U S A. 2012. PMID: 22586074 Free PMC article.

5

COMPASS: a suite of pre- and post-search proteomics software tools for OMSSA.

Wenger CD, Phanstiel DH, Lee MV, Bailey DJ, Coon JJ. Wenger CD, et al. Among authors: bailey dj. Proteomics. 2011 Mar;11(6):1064-74. doi: 10.1002/pmic.201000616. Epub 2011 Feb 7. Proteomics. 2011. PMID: 21298793 Free PMC article.

6

Statistical analysis of electron transfer dissociation pairwise fragmentation patterns.

Li W, Song C, Bailey DJ, Tseng GC, Coon JJ, Wysocki VH. Li W, et al. Among authors: bailey dj. Anal Chem. 2011 Dec 15;83(24):9540-5. doi: 10.1021/ac202327r. Epub 2011 Nov 28. Anal Chem. 2011. PMID: 22022956 Free PMC article.

7

Characterizing peptide neutral losses induced by negative electron-transfer dissociation (NETD).

Rumachik NG, McAlister GC, Russell JD, Bailey DJ, Wenger CD, Coon JJ. Rumachik NG, et al. Among authors: bailey dj. J Am Soc Mass Spectrom. 2012 Apr;23(4):718-27. doi: 10.1007/s13361-011-0331-5. J Am Soc Mass Spectrom. 2012. PMID: 22290482 Free PMC article.

8

Rapid phosphoproteomic and transcriptomic changes in the rhizobia-legume symbiosis.

Rose CM, Venkateshwaran M, Volkening JD, Grimsrud PA, Maeda J, Bailey DJ, Park K, Howes-Podoll M, den Os D, Yeun LH, Westphall MS, Sussman MR, Ané JM, Coon JJ. Rose CM, et al. Among authors: bailey dj. Mol Cell Proteomics. 2012 Sep;11(9):724-44. doi: 10.1074/mcp.M112.019208. Epub 2012 Jun 8. Mol Cell Proteomics. 2012. PMID: 22683509 Free PMC article.

9

A proteogenomic survey of the Medicago truncatula genome.

Volkening JD, Bailey DJ, Rose CM, Grimsrud PA, Howes-Podoll M, Venkateshwaran M, Westphall MS, Ané JM, Coon JJ, Sussman MR. Volkening JD, et al. Among authors: bailey dj. Mol Cell Proteomics. 2012 Oct;11(10):933-44. doi: 10.1074/mcp.M112.019471. Epub 2012 Jul 5. Mol Cell Proteomics. 2012. PMID: 22774004 Free PMC article.

10

A quantitative map of the liver mitochondrial phosphoproteome reveals posttranslational control of ketogenesis.

Grimsrud PA, Carson JJ, Hebert AS, Hubler SL, Niemi NM, Bailey DJ, Jochem A, Stapleton DS, Keller MP, Westphall MS, Yandell BS, Attie AD, Coon JJ, Pagliarini DJ. Grimsrud PA, et al. Among authors: bailey dj. Cell Metab. 2012 Nov 7;16(5):672-83. doi: 10.1016/j.cmet.2012.10.004. Cell Metab. 2012. PMID: 23140645 Free PMC article.

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