Pressé S - Search Results

1

Single molecule conformational memory extraction: p5ab RNA hairpin.

Pressé S, Peterson J, Lee J, Elms P, MacCallum JL, Marqusee S, Bustamante C, Dill K. Pressé S, et al. J Phys Chem B. 2014 Jun 19;118(24):6597-603. doi: 10.1021/jp500611f. Epub 2014 Jun 5. J Phys Chem B. 2014. PMID: 24898871 Free PMC article.

2

Nonuniversal power law scaling in the probability distribution of scientific citations.

Peterson GJ, Pressé S, Dill KA. Peterson GJ, et al. Among authors: presse s. Proc Natl Acad Sci U S A. 2010 Sep 14;107(37):16023-7. doi: 10.1073/pnas.1010757107. Epub 2010 Aug 30. Proc Natl Acad Sci U S A. 2010. PMID: 20805513 Free PMC article.

3

Dynamical fluctuations in biochemical reactions and cycles.

Pressé S, Ghosh K, Phillips R, Dill KA. Pressé S, et al. Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Sep;82(3 Pt 1):031905. doi: 10.1103/PhysRevE.82.031905. Epub 2010 Sep 15. Phys Rev E Stat Nonlin Soft Matter Phys. 2010. PMID: 21230106

4

Modeling stochastic dynamics in biochemical systems with feedback using maximum caliber.

Pressé S, Ghosh K, Dill KA. Pressé S, et al. J Phys Chem B. 2011 May 19;115(19):6202-12. doi: 10.1021/jp111112s. Epub 2011 Apr 27. J Phys Chem B. 2011. PMID: 21524067 Free PMC article.

5

Markov processes follow from the principle of maximum caliber.

Ge H, Pressé S, Ghosh K, Dill KA. Ge H, et al. Among authors: presse s. J Chem Phys. 2012 Feb 14;136(6):064108. doi: 10.1063/1.3681941. J Chem Phys. 2012. PMID: 22360170 Free PMC article.

6

Simulated evolution of protein-protein interaction networks with realistic topology.

Peterson GJ, Pressé S, Peterson KS, Dill KA. Peterson GJ, et al. Among authors: presse s. PLoS One. 2012;7(6):e39052. doi: 10.1371/journal.pone.0039052. Epub 2012 Jun 29. PLoS One. 2012. PMID: 22768057 Free PMC article.

7

A derivation of the master equation from path entropy maximization.

Lee J, Pressé S. Lee J, et al. Among authors: presse s. J Chem Phys. 2012 Aug 21;137(7):074103. doi: 10.1063/1.4743955. J Chem Phys. 2012. PMID: 22920099 Free PMC article.

8

Microcanonical origin of the maximum entropy principle for open systems.

Lee J, Pressé S. Lee J, et al. Among authors: presse s. Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Oct;86(4 Pt 1):041126. doi: 10.1103/PhysRevE.86.041126. Epub 2012 Oct 15. Phys Rev E Stat Nonlin Soft Matter Phys. 2012. PMID: 23214548

9

Extracting conformational memory from single-molecule kinetic data.

Pressé S, Lee J, Dill KA. Pressé S, et al. J Phys Chem B. 2013 Jan 17;117(2):495-502. doi: 10.1021/jp309420u. Epub 2013 Jan 9. J Phys Chem B. 2013. PMID: 23259771 Free PMC article.

10

Nonadditive entropies yield probability distributions with biases not warranted by the data.

Pressé S, Ghosh K, Lee J, Dill KA. Pressé S, et al. Phys Rev Lett. 2013 Nov 1;111(18):180604. doi: 10.1103/PhysRevLett.111.180604. Epub 2013 Nov 1. Phys Rev Lett. 2013. PMID: 24237501

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