Breitling R - Search Results

1

MetAssign: probabilistic annotation of metabolites from LC-MS data using a Bayesian clustering approach.

Daly R, Rogers S, Wandy J, Jankevics A, Burgess KE, Breitling R. Daly R, et al. Among authors: breitling r. Bioinformatics. 2014 Oct;30(19):2764-71. doi: 10.1093/bioinformatics/btu370. Epub 2014 Jun 9. Bioinformatics. 2014. PMID: 24916385 Free PMC article.

2

A lock-and-key model for protein-protein interactions.

Morrison JL, Breitling R, Higham DJ, Gilbert DR. Morrison JL, et al. Among authors: breitling r. Bioinformatics. 2006 Aug 15;22(16):2012-9. doi: 10.1093/bioinformatics/btl338. Epub 2006 Jun 20. Bioinformatics. 2006. PMID: 16787977

3

The latent process decomposition of cDNA microarray data sets.

Rogers S, Girolami M, Campbell C, Breitling R. Rogers S, et al. Among authors: breitling r. IEEE/ACM Trans Comput Biol Bioinform. 2005 Apr-Jun;2(2):143-56. doi: 10.1109/TCBB.2005.29. IEEE/ACM Trans Comput Biol Bioinform. 2005. PMID: 17044179

4

Probabilistic assignment of formulas to mass peaks in metabolomics experiments.

Rogers S, Scheltema RA, Girolami M, Breitling R. Rogers S, et al. Among authors: breitling r. Bioinformatics. 2009 Feb 15;25(4):512-8. doi: 10.1093/bioinformatics/btn642. Epub 2008 Dec 18. Bioinformatics. 2009. PMID: 19095699

5

Towards an unbiased metabolic profiling of protozoan parasites: optimisation of a Leishmania sampling protocol for HILIC-orbitrap analysis.

t'Kindt R, Jankevics A, Scheltema RA, Zheng L, Watson DG, Dujardin JC, Breitling R, Coombs GH, Decuypere S. t'Kindt R, et al. Among authors: breitling r. Anal Bioanal Chem. 2010 Nov;398(5):2059-69. doi: 10.1007/s00216-010-4139-0. Epub 2010 Sep 8. Anal Bioanal Chem. 2010. PMID: 20824428

6

Metabolomics to unveil and understand phenotypic diversity between pathogen populations.

t'Kindt R, Scheltema RA, Jankevics A, Brunker K, Rijal S, Dujardin JC, Breitling R, Watson DG, Coombs GH, Decuypere S. t'Kindt R, et al. Among authors: breitling r. PLoS Negl Trop Dis. 2010 Nov 30;4(11):e904. doi: 10.1371/journal.pntd.0000904. PLoS Negl Trop Dis. 2010. PMID: 21152055 Free PMC article.

7

PeakML/mzMatch: a file format, Java library, R library, and tool-chain for mass spectrometry data analysis.

Scheltema RA, Jankevics A, Jansen RC, Swertz MA, Breitling R. Scheltema RA, et al. Among authors: breitling r. Anal Chem. 2011 Apr 1;83(7):2786-93. doi: 10.1021/ac2000994. Epub 2011 Mar 14. Anal Chem. 2011. PMID: 21401061

8

Toward global metabolomics analysis with hydrophilic interaction liquid chromatography-mass spectrometry: improved metabolite identification by retention time prediction.

Creek DJ, Jankevics A, Breitling R, Watson DG, Barrett MP, Burgess KE. Creek DJ, et al. Among authors: breitling r. Anal Chem. 2011 Nov 15;83(22):8703-10. doi: 10.1021/ac2021823. Epub 2011 Oct 21. Anal Chem. 2011. PMID: 21928819

9

Metabolomic analysis of a synthetic metabolic switch in Streptomyces coelicolor A3(2).

Jankevics A, Merlo ME, de Vries M, Vonk RJ, Takano E, Breitling R. Jankevics A, et al. Among authors: breitling r. Proteomics. 2011 Dec;11(24):4622-31. doi: 10.1002/pmic.201100254. Epub 2011 Nov 10. Proteomics. 2011. PMID: 21956891

10

Exploring the metabolic state of microorganisms using metabolomics.

Merlo ME, Jankevics A, Takano E, Breitling R. Merlo ME, et al. Among authors: breitling r. Bioanalysis. 2011 Nov;3(21):2443-58. doi: 10.4155/bio.11.248. Bioanalysis. 2011. PMID: 22074285 Review.

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