Meng J - Search Results

1

A protocol for RNA methylation differential analysis with MeRIP-Seq data and exomePeak R/Bioconductor package.

Meng J, Lu Z, Liu H, Zhang L, Zhang S, Chen Y, Rao MK, Huang Y. Meng J, et al. Methods. 2014 Oct 1;69(3):274-81. doi: 10.1016/j.ymeth.2014.06.008. Epub 2014 Jun 27. Methods. 2014. PMID: 24979058 Free PMC article.

2

Enrichment constrained time-dependent clustering analysis for finding meaningful temporal transcription modules.

Meng J, Gao SJ, Huang Y. Meng J, et al. Bioinformatics. 2009 Jun 15;25(12):1521-7. doi: 10.1093/bioinformatics/btp235. Epub 2009 Apr 7. Bioinformatics. 2009. PMID: 19351618 Free PMC article.

3

Robust inference of the context specific structure and temporal dynamics of gene regulatory network.

Meng J, Lu M, Chen Y, Gao SJ, Huang Y. Meng J, et al. BMC Genomics. 2010 Dec 1;11 Suppl 3(Suppl 3):S11. doi: 10.1186/1471-2164-11-S3-S11. BMC Genomics. 2010. PMID: 21143778 Free PMC article.

4

An Iterative Time Windowed Signature Algorithm for Time Dependent Transcription Module Discovery.

Meng J, Gao SJ, Huang Y. Meng J, et al. IEEE Int Workshop Genomic Signal Process Stat. 2008;2008:1-4. doi: 10.1109/GENSIPS.2008.4555659. IEEE Int Workshop Genomic Signal Process Stat. 2008. PMID: 21552463 Free PMC article.

5

Biclustering of time series microarray data.

Meng J, Huang Y. Meng J, et al. Methods Mol Biol. 2012;802:87-100. doi: 10.1007/978-1-61779-400-1_6. Methods Mol Biol. 2012. PMID: 22130875

6

Bayesian non-negative factor analysis for reconstructing transcription factor mediated regulatory networks.

Meng J, Zhang JM, Chen Y, Huang Y. Meng J, et al. Proteome Sci. 2011 Oct 14;9 Suppl 1(Suppl 1):S9. doi: 10.1186/1477-5956-9-S1-S9. Proteome Sci. 2011. PMID: 22166063 Free PMC article.

7

Direct and efficient cellular transformation of primary rat mesenchymal precursor cells by KSHV.

Jones T, Ye F, Bedolla R, Huang Y, Meng J, Qian L, Pan H, Zhou F, Moody R, Wagner B, Arar M, Gao SJ. Jones T, et al. Among authors: meng j. J Clin Invest. 2012 Mar;122(3):1076-81. doi: 10.1172/JCI58530. Epub 2012 Feb 1. J Clin Invest. 2012. PMID: 22293176 Free PMC article.

8

A nonparametric Bayesian approach for clustering bisulfate-based DNA methylation profiles.

Zhang L, Meng J, Liu H, Huang Y. Zhang L, et al. Among authors: meng j. BMC Genomics. 2012;13 Suppl 6(Suppl 6):S20. doi: 10.1186/1471-2164-13-S6-S20. Epub 2012 Oct 26. BMC Genomics. 2012. PMID: 23134689 Free PMC article.

9

Exome-based analysis for RNA epigenome sequencing data.

Meng J, Cui X, Rao MK, Chen Y, Huang Y. Meng J, et al. Bioinformatics. 2013 Jun 15;29(12):1565-7. doi: 10.1093/bioinformatics/btt171. Epub 2013 Apr 14. Bioinformatics. 2013. PMID: 23589649 Free PMC article.

10

Classification of imperfectly time-locked image RSVP events with EEG device.

Meng J, Meriño LM, Robbins K, Huang Y. Meng J, et al. Neuroinformatics. 2014 Apr;12(2):261-75. doi: 10.1007/s12021-013-9203-4. Neuroinformatics. 2014. PMID: 24037139

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