Vaudel M - Search Results

1

Performance of super-SILAC based quantitative proteomics for comparison of different acute myeloid leukemia (AML) cell lines.

Aasebø E, Vaudel M, Mjaavatten O, Gausdal G, Van der Burgh A, Gjertsen BT, Døskeland SO, Bruserud O, Berven FS, Selheim F. Aasebø E, et al. Among authors: vaudel m. Proteomics. 2014 Sep;14(17-18):1971-6. doi: 10.1002/pmic.201300448. Epub 2014 Aug 8. Proteomics. 2014. PMID: 25044641

2

SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches.

Vaudel M, Barsnes H, Berven FS, Sickmann A, Martens L. Vaudel M, et al. Proteomics. 2011 Mar;11(5):996-9. doi: 10.1002/pmic.201000595. Epub 2011 Jan 31. Proteomics. 2011. PMID: 21337703

3

compomics-utilities: an open-source Java library for computational proteomics.

Barsnes H, Vaudel M, Colaert N, Helsens K, Sickmann A, Berven FS, Martens L. Barsnes H, et al. Among authors: vaudel m. BMC Bioinformatics. 2011 Mar 8;12:70. doi: 10.1186/1471-2105-12-70. BMC Bioinformatics. 2011. PMID: 21385435 Free PMC article.

4

Introduction to opportunities and pitfalls in functional mass spectrometry based proteomics.

Vaudel M, Sickmann A, Martens L. Vaudel M, et al. Biochim Biophys Acta. 2014 Jan;1844(1 Pt A):12-20. doi: 10.1016/j.bbapap.2013.06.019. Epub 2013 Jul 9. Biochim Biophys Acta. 2014. PMID: 23845992 Review.

5

Shedding light on black boxes in protein identification.

Vaudel M, Venne AS, Berven FS, Zahedi RP, Martens L, Barsnes H. Vaudel M, et al. Proteomics. 2014 May;14(9):1001-5. doi: 10.1002/pmic.201300488. Epub 2014 Mar 20. Proteomics. 2014. PMID: 24678044

6

Bioinformatics for proteomics: opportunities at the interface between the scientists, their experiments, and the community.

Vaudel M, Barsnes H, Martens L, Berven FS. Vaudel M, et al. Methods Mol Biol. 2014;1156:239-48. doi: 10.1007/978-1-4939-0685-7_16. Methods Mol Biol. 2014. PMID: 24791993

7

Exploring the human plasma proteome for humoral mediators of remote ischemic preconditioning--a word of caution.

Helgeland E, Breivik LE, Vaudel M, Svendsen ØS, Garberg H, Nordrehaug JE, Berven FS, Jonassen AK. Helgeland E, et al. Among authors: vaudel m. PLoS One. 2014 Oct 15;9(10):e109279. doi: 10.1371/journal.pone.0109279. eCollection 2014. PLoS One. 2014. PMID: 25333471 Free PMC article.

8

Carboxyl-ester lipase maturity-onset diabetes of the young disease protein biomarkers in secretin-stimulated duodenal juice.

Bjorlykke Y, Vethe H, Vaudel M, Barsnes H, Berven FS, Tjora E, Raeder H. Bjorlykke Y, et al. Among authors: vaudel m. J Proteome Res. 2015 Jan 2;14(1):521-30. doi: 10.1021/pr500750z. Epub 2014 Nov 4. J Proteome Res. 2015. PMID: 25369532

9

JSparklines: making tabular proteomics data come alive.

Barsnes H, Vaudel M, Martens L. Barsnes H, et al. Among authors: vaudel m. Proteomics. 2015 Apr;15(8):1428-31. doi: 10.1002/pmic.201400356. Epub 2015 Jan 19. Proteomics. 2015. PMID: 25422159

10

PeptideShaker enables reanalysis of MS-derived proteomics data sets.

Vaudel M, Burkhart JM, Zahedi RP, Oveland E, Berven FS, Sickmann A, Martens L, Barsnes H. Vaudel M, et al. Nat Biotechnol. 2015 Jan;33(1):22-4. doi: 10.1038/nbt.3109. Nat Biotechnol. 2015. PMID: 25574629 No abstract available.

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